Gene omics information

Query gene ID At1g04350
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At1g043508395422-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseS.X.H.G.
0.8994.6At1g71480843489nuclear transport factor 2 (NTF2) family proteinF:protein transporter activity;P:transport, protein import into nucleus;C:chloroplast thylakoid membrane, nucleus, intracellular, chloroplast;PBOS.X.H.G.
0.5570.6At1g52870841720peroxisomal membrane protein-relatedF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MPFOS.X.H.G.
0.2522.6At5g57040835808lactoylglutathione lyase family protein / glyoxalase I family proteinF:catalytic activity;P:metabolic process;C:chloroplast;BPOMS.X.H.G.
0.157.8At1g68830843215STN7 (Stt7 homolog STN7)STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptationS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.499.6E-ATMX-32-raw-cel-1562974681
19.999.6GSM7717504h low CO2 + light replicate AGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expression
15.099.4E-ATMX-32-raw-cel-1562974595
14.599.4E-ATMX-32-raw-cel-1562974621
13.299.4GSM133787Brueggemann_A-5-Brueg-Mck_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
13.099.4GSM133786Brueggemann_A-4-Brueg-PpH_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
12.599.3E-ATMX-32-raw-cel-1562974409
11.899.3GSM260957A5-LLOYD-CON_REP2GSE10326Transcriptome analysis of pho3
11.799.3GSM260879A2-Greco-WTGSE10322Higher order transcriptional regulation conferred by the bountiful gain of function mutant
11.699.3GSM268249dor-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.687e-167587At1g043808395352-oxoglutarate-dependent dioxygenase, putativeencodes a protein similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.691e-134480At5g59540836073oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.682e-102373At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMC.G.S.X.
0.422e-31137At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseC.G.S.X.
0.395e-29129At5g434408343642-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseC.G.S.X.
0.182e-654At1g066408371732-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-446Glycine maxGmaAffx.75577.1.S1_atAW279266--1e-9At1g066202-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.023e-136Hordeum vulgareContig19399_atContig19399--2e+0At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.021e+036Oryza sativaOs.24955.1.A1_x_at---0C.G.S.X.
0.065e-240Populus trichocarpaPtpAffx.208720.1.S1_atpmrna17290hypothetical protein-1e-1At5g434402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.122e-448Triticum aestivumTaAffx.31520.1.S1_atCA614210--5e-5At1g043502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.046e-134Vitis vinifera1612528_atCB982094--2e-12At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)C.G.S.X.
0.034e+032Zea maysZmAffx.1394.1.S1_at40794996-69--2e-1At5g46013unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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