Gene omics information

Query gene ID At1g03900
Gene name ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At1g03900839378ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.S.X.H.G.
0.6781.6At4g15470827218-F:unknown;P:unknown;C:unknown;BOMPFVS.X.H.G.
0.6781.6At5g53310835412myosin heavy chain-relatedF:motor activity;P:biological_process unknown;C:plasma membrane;MOFPS.X.H.G.
0.4862.5At3g04090819564SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A)Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.S.X.H.G.
0.4050.8At3g46060823749ATRAB8Asmall GTP-binding protein (ara-3)S.X.H.G.
0.3133.8At3g04880819648DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).S.X.H.G.
0.2319.3At5g58060835918YKT61member of YKT6 Gene FamilyS.X.H.G.
0.2319.3At5g54680835557ILR3 (iaa-leucine resistant3)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFBAS.X.H.G.
0.2014.4At4g28770828998-F:molecular_function unknown;P:unknown;C:plasma membrane, vacuole, membrane;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.699.0GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.998.9GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.398.8GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.098.7GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
6.998.7GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
6.798.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
6.698.7GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
6.498.6GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
5.998.5GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
5.898.4GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-344At5g66540836786-F:molecular_function unknown;P:rRNA processing;C:cytosol, nucleolus, nucleus;MOFBPVAC.G.S.X.
0.017e-342At1g49890841412unknown proteinF:unknown;P:unknown;C:chloroplast;OMFBPVAC.G.S.X.
0.023e-240At4g21660828253proline-rich spliceosome-associated (PSP) family proteinF:unknown;P:mRNA processing;C:nucleus, chloroplast;MOFPVBAC.G.S.X.
0.013e-240At3g14810820710MSL5 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 5)F:unknown;P:unknown;C:membrane;BOFAPMC.G.S.X.
0.023e-240At1g10720837615BSD domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFVBC.G.S.X.
0.021e-138At4g27840828897-F:molecular_function unknown;P:transport;C:endomembrane system;PC.G.S.X.
0.021e-138At3g05100819672-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOFAC.G.S.X.
0.031e-138At3g06020819773unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.197e-22105Glycine maxGma.1278.1.S1_a_atBE020433--4e-20At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.146e-1477Hordeum vulgareContig8531_atContig8531--2e-13At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.131e-1481Oryza sativaOs10g0476000AK065629.1-Conserved hypothetical protein1e-14At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.372e-1997Populus trichocarpaPtp.5837.1.S1_atCA821481ABC transporter family protein-1e-19At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.143e-1169Triticum aestivumTa.3797.1.S1_a_atCK214587--5e-11At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.332e-1995Vitis vinifera1614591_atCF216033hypothetical protein LOC100254924-7e-19At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
0.199e-1993Zea maysZm.5635.1.A1_atAY111142.1hypothetical protein LOC100192009-3e-18At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006858The transport of substances that occurs outside cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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