Gene omics information

Query gene ID At1g02950
Gene name ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g02950838240ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.9998.1At1g06490837160ATGSL07 (glucan synthase-like 7)encodes a gene similar to callose synthaseS.X.H.G.
0.9998.1At1g29520839829AWPM-19-like membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;PS.X.H.G.
0.9998.1At1g63310842637-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9998.1At3g13590820561DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POS.X.H.G.
0.9998.1At3g17380821002meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.9998.1At4g35970829751APX5 (ASCORBATE PEROXIDASE 5)Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.S.X.H.G.
0.9998.1At5g04890830370RTM2 (RESTRICTED TEV MOVEMENT 2)Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs).S.X.H.G.
0.9998.1At5g38070833787zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVS.X.H.G.
0.9998.1At5g45320834568-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1481.7100.0GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
865.2100.0GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
739.3100.0GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
340.6100.0GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
122.799.9GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
39.399.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.499.7GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
33.099.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.799.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.899.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.402e-1583At1g02940839479GSTF5 (GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.052e-550At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.072e-240At2g02930814822ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.024e-136At5g20870832210glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOBC.G.S.X.
0.024e-136At1g79030844244DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putativeF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Glycine maxGmaAffx.51502.1.S1_atBM094491--3e-6At1g28960ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)C.G.S.X.
0.023e+032Hordeum vulgareContig7850_atContig7850--7e+0At5g51845-C.G.S.X.
0.023e+034Oryza sativaOs01g0374000BI803090-Glutathione transferase (EC 2.5.1.18)2e-3At1g02940GSTF5 (GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5)C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.2229.2.S1_atBU880390hypothetical protein-3e-10At4g02520ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)C.G.S.X.
0.036e+032Triticum aestivumTaAffx.55202.1.S1_atCA670191--3e+0At1g02950ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4)C.G.S.X.
0.067e-340Vitis vinifera1616933_atCB345010hypothetical protein LOC100265903-1e-13At1g02920GSTF7C.G.S.X.
0.031e-240Zea maysZm.19121.1.A1_atCO519654--6e-6At5g51130methyltransferaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0009407The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00480Link to KEGG PATHWAYGlutathione metabolism
00980Link to KEGG PATHWAYMetabolism of xenobiotics by cytochrome P450
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