CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g02813

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.74 86.1 At1g02813 839360 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO S.X. H.G.
0.97 97.6 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.97 97.6 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF S.X. H.G.
0.95 97.0 At1g01280 839470 CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2) member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis). S.X. H.G.
0.95 97.0 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF S.X. H.G.
0.95 97.0 At3g42960 823352 ATA1 (ARABIDOPSIS TAPETUM 1) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells. S.X. H.G.
0.95 97.0 At4g20420 827790 tapetum-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.92 96.0 At3g07450 819933 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.92 96.0 At4g14080 827044 MEE48 (maternal effect embryo arrest 48) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO S.X. H.G.
0.92 96.0 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
264.1 100.0 E-MEXP-1592-raw-cel-1617526920
255.1 100.0 E-MEXP-1592-raw-cel-1617526984
222.7 100.0 E-MEXP-1592-raw-cel-1617526952
196.8 100.0 E-MEXP-1592-raw-cel-1617526976
173.3 100.0 E-MEXP-1592-raw-cel-1617526912
158.4 99.9 E-MEXP-1592-raw-cel-1617526848
148.8 99.9 E-MEXP-1592-raw-cel-1617526944
124.7 99.9 E-MEXP-1592-raw-cel-1617526824
112.3 99.9 E-MEXP-849-raw-cel-1181980894
108.9 99.9 E-MEXP-849-raw-cel-1181980942
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 6e-2 38 At5g53800 835461 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA C.G. S.X.
0.05 6e-2 38 At4g02360 827767 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO C.G. S.X.
0.04 6e-2 38 At3g50960 824260 PLP3a (Phosducin-like protein 3 homolog) Encodes a protein that functions in microtubule assembly. PLP3a can bind to several different tubulin family members in Y2H assays. Plants with reduced levels of both PLP3a and PLP3b (At5g66410) show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy. C.G. S.X.
0.02 6e-2 38 At3g28540 822484 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV C.G. S.X.
0.03 9e-1 34 At5g66160 836748 JR700 Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. C.G. S.X.
0.03 9e-1 34 At5g13880 831235 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 9e-1 34 At4g33280 829464 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:vacuole;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Glycine max PsAffx.CL447Contig1_s_at PsAffx.CL447Contig1 - - 9e-2 At4g21740 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig12924_at Contig12924 - - 3e+0 At4g14165 F-box family protein-related C.G. S.X.
0.03 4e-1 36 Oryza sativa Os08g0129200 AK101577.1 - Cold shock protein-1 1e-10 At4g38680 GRP2 (GLYCINE RICH PROTEIN 2) C.G. S.X.
0.05 1e+0 34 Populus trichocarpa PtpAffx.99888.1.A1_at DN485512 - - 1e-2 At1g33040 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) C.G. S.X.
0.04 9e-1 34 Triticum aestivum Ta.12754.1.S1_x_at BQ170366 - - 2e-1 At2g41905 unknown protein C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1622069_at CD801772 - - 2e+0 At1g74340 dolichol phosphate-mannose biosynthesis regulatory protein-related C.G. S.X.
0.04 6e+0 30 Zea mays ZmAffx.1331.1.S1_s_at 40794996-39 - - 2e+0 Atcg01300 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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