CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g02700

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.75 86.9 At1g02700 839492 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFO S.X. H.G.
1.00 100.0 At3g58450 825014 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFM S.X. H.G.
0.93 96.4 At5g42290 834234 transcription activator-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.88 94.0 At3g12960 820482 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.86 93.1 At3g05260 819690 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV S.X. H.G.
0.86 93.1 At4g27530 828862 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.80 89.8 At3g50980 824262 XERO1 (DEHYDRIN XERO 1) F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PM S.X. H.G.
0.77 88.0 At1g27990 839692 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.75 86.9 At5g22470 832308 NAD+ ADP-ribosyltransferase F:NAD+ ADP-ribosyltransferase activity;P:protein amino acid ADP-ribosylation;C:intracellular, nucleus;MOPFBV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
524.5 100.0 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
421.8 100.0 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
372.2 100.0 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
334.2 100.0 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
295.6 100.0 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
282.7 100.0 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
274.4 100.0 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
266.4 100.0 GSM131704 ATGE_83_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
264.9 100.0 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
260.9 100.0 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.11 1e-7 57 At4g02140 827460 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P C.G. S.X.
0.01 6e-3 42 At5g64710 836592 unknown protein F:unknown;P:biological_process unknown;C:unknown;PMBFOA C.G. S.X.
0.01 2e-2 40 At5g07810 830674 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein F:helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity;P:unknown;C:unknown;MBOFPVA C.G. S.X.
0.03 9e-2 38 At2g34980 818062 SETH1 Encodes a putative phosphatidylinositol-glycan synthase subunit C gene. It is involved in the first step of the glycosylphosphatidylinositol (GPI) biosynthetic pathway. C.G. S.X.
0.01 4e-1 36 At5g49930 835056 emb1441 (embryo defective 1441) F:zinc ion binding, nucleic acid binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;OMBFAPV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Glycine max GmaAffx.68810.1.S1_at BI975097 - - 6e-61 At4g02930 elongation factor Tu, putative / EF-Tu, putative C.G. S.X.
0.04 2e-1 36 Hordeum vulgare HS08C09u_x_at HS08C09u - - 6e-14 At5g10360 EMB3010 (embryo defective 3010) C.G. S.X.
0.03 7e-1 36 Oryza sativa OsAffx.20509.1.S1_at - - - 0 C.G. S.X.
0.03 8e+0 32 Populus trichocarpa PtpAffx.98083.1.S1_at BU894741 hypothetical protein - 2e+0 At1g42990 ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60) C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.9116.3.A1_at BG906296 - - 8e-1 At5g64850 unknown protein C.G. S.X.
0.05 5e-4 44 Vitis vinifera 1610634_at CF517455 hypothetical protein LOC100262313 - 1e-3 At1g02700 unknown protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.5851.2.A1_at BM267859 hypothetical protein LOC100278946 - 4e-1 At3g28220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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