Gene omics information

Query gene ID At1g02490
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At1g02490839518unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.5065.3At3g11380820310pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMBFS.X.H.G.
0.4050.8At1g74110843751CYP78A10member of CYP78AS.X.H.G.
0.3541.6At5g43110834328APUM14 (Arabidopsis Pumilio 14)F:RNA binding, binding;P:unknown;C:cellular_component unknown;FOMPS.X.H.G.
0.3338.1At2g42180818818unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2522.6At3g52690824435-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
590.2100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
506.1100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
339.8100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
295.8100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
294.4100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
284.2100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
269.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
251.7100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
213.4100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
206.8100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-238At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.C.G.S.X.
0.012e-134At5g26160832685unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVC.G.S.X.
0.048e-132At3g06590819838transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PMOC.G.S.X.
0.018e-132At1g22530838859PATL2 (PATELLIN 2)F:transporter activity;P:transport;C:plasma membrane, chloroplast;MOBFPVAC.G.S.X.
0.023e+030At5g18460831964unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBC.G.S.X.
0.023e+030At5g17160831580unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVAC.G.S.X.
0.023e+030At5g07820830675-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.013e+030At5g16910831554CSLD2 (CELLULOSE-SYNTHASE LIKE D2)encodes a gene similar to cellulose synthase. Located in golgi membranes.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e+030Glycine maxGmaAffx.44840.1.A1_atAW471584--4e-1At1g69310WRKY57C.G.S.X.
0.031e-134Hordeum vulgareContig14291_atContig14291--2e+0At1g02490unknown proteinC.G.S.X.
0.073e-238Oryza sativaOsAffx.22157.1.S1_at---0C.G.S.X.
0.044e+030Populus trichocarpaPtpAffx.40540.1.S1_atBU823491hypothetical protein-1e-15At1g57590carboxylesteraseC.G.S.X.
0.071e+128Triticum aestivumTaAffx.93369.1.S1_atBJ213884--1e-1At3g59400GUN4C.G.S.X.
0.034e+028Vitis vinifera1613333_atCF213006hypothetical protein LOC100248500-9e-70At3g03780AtMS2C.G.S.X.
0.045e+028Zea maysZm.832.1.A1_atAY107728.1hypothetical protein LOC100275137-1e+0At1g54140TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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