Gene omics information

Query gene ID At1g02330
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At1g02330839367-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.3338.1At3g20430821588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBS.X.H.G.
0.1912.7At3g15590820799DNA-binding protein, putativeF:DNA binding;P:unknown;C:mitochondrion;PMOFBS.X.H.G.
0.157.8At3g56510824818TBP-binding protein, putativeF:TATA-binding protein binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.051.1At2g34780818043MEE22 (MATERNAL EFFECT EMBRYO ARREST 22)Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.S.X.H.G.
0.051.1At2g40430818636-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
62.799.8GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
44.799.8GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
27.699.7GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.999.6GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
20.499.6GSM252685Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
19.899.6GSM252664Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
18.899.5GSM284391Arabidopsis GPE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
18.599.5GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
16.299.5GSM134315Penfield_1-17_embryo-PAC_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
16.199.5E-ATMX-33-raw-cel-1562596197
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.027e-342At4g00830827998RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.021e-138At5g62390836360ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7)A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.C.G.S.X.
0.011e-138At4g20090827754EMB1025 (embryo defective 1025)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;POMFBAC.G.S.X.
0.011e-138At4g18300827556eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinF:binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity;P:biosynthetic process, regulation of translational initiation;C:unknown;BOMFAPC.G.S.X.
0.021e-138At3g47940823949DNAJ heat shock protein, putativeF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVC.G.S.X.
0.031e-138At2g40200818611basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFBC.G.S.X.
0.031e-138At1g71970843528unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMC.G.S.X.
0.024e-136At5g23940832459EMB3009 (embryo defective 3009)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.312e-1377Glycine maxGma.12486.1.S1_atCD414021--2e-13At1g02330-C.G.S.X.
0.032e-136Hordeum vulgareContig12825_atContig12825--9e-1At3g59680unknown proteinC.G.S.X.
0.062e-448Oryza sativaOsAffx.2557.1.S1_x_at---0C.G.S.X.
0.411e-1171Populus trichocarpaPtpAffx.22961.2.S1_a_atAJ772125hypothetical protein-6e-12At1g02330-C.G.S.X.
0.032e+034Triticum aestivumTaAffx.5357.1.S1_atCA713422--5e-1At2g23320WRKY15C.G.S.X.
0.058e-340Vitis vinifera1620514_atCF207980hypothetical protein LOC100250416-2e-2At1g02330-C.G.S.X.
0.032e-136Zea maysZm.11659.1.S1_s_atBM379730hypothetical protein LOC100274758-6e-2At2g24550unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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