Gene omics information

Query gene ID At1g02220
Gene name ANAC003 (Arabidopsis NAC domain containing protein 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2522.6At1g02220839476ANAC003 (Arabidopsis NAC domain containing protein 3)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PFS.X.H.G.
0.6075.7At5g67430836879GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PBAS.X.H.G.
0.5065.3At4g11880826795AGL14 (agamous-like 14)AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.S.X.H.G.
0.1912.7At1g51830841610ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAS.X.H.G.
0.135.8At2g48090819421unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.114.1At3g44540823579FAR4 (FATTY ACID REDUCTASE 4)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
101.299.9GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
70.899.9GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
57.399.8GSM131298AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
52.199.8GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
50.299.8GSM131465AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
49.799.8GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
48.599.8GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
45.599.8GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
44.499.8GSM131457AtGen_6-9821_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
43.699.8GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.741e-134480At3g04420819597anac048 (Arabidopsis NAC domain containing protein 48)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POC.G.S.X.
0.425e-57222At1g02250839390anac005 (Arabidopsis NAC domain containing protein 5)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.511e-48194At1g02230837630ANAC004 (Arabidopsis NAC domain containing protein 4)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PFOC.G.S.X.
0.272e-37157At3g04410819596transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.022e-448At3g56570824824SET domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.029e-342At5g58760835990DDB2 (damaged DNA-binding 2)F:nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAC.G.S.X.
0.029e-342At5g21940832254unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMPFBC.G.S.X.
0.024e-240At5g40340834032PWWP domain-containing proteinF:molecular_function unknown;P:unknown;C:nucleolus;MOFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-240Glycine maxGmaAffx.90395.1.A1_s_atCF807499KS-type dehydrin SLTI629-2e-1At1g54410dehydrin family proteinC.G.S.X.
0.047e-238Hordeum vulgareContig25984_atContig25984--9e-1At4g24380unknown proteinC.G.S.X.
0.037e-240Oryza sativaOs08g03807009636.m02903--1e+0At5g42960unknown proteinC.G.S.X.
0.035e-240Populus trichocarpaPtpAffx.212663.1.S1_atpmrna24774hypothetical protein-2e-1At4g00270DNA-binding storekeeper protein-relatedC.G.S.X.
0.034e-240Triticum aestivumTaAffx.51251.1.S1_atCA728679--2e+0At4g21500unknown proteinC.G.S.X.
0.041e-240Vitis vinifera1621823_atCF214240hypothetical protein LOC100253216-4e+0At5g66000unknown proteinC.G.S.X.
0.023e-136Zea maysZm.9649.1.A1_atBM337167hypothetical protein LOC100277264-1e+0At1g43720unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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