Gene omics information

Query gene ID At1g02050
Gene name chalcone and stilbene synthase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFS.X.H.G.
1.00100.0At1g69500843283electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAVS.X.H.G.
1.00100.0At4g14080827044MEE48 (maternal effect embryo arrest 48)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;POS.X.H.G.
0.9496.7At1g62940842596ACOS5 (ACYL-COA SYNTHETASE 5)encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.S.X.H.G.
0.9496.7At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.9496.7At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.S.X.H.G.
0.9496.7At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.9496.7At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9496.7At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFS.X.H.G.
0.9496.7At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
264.6100.0GSM131578ATGE_31_C2GSE5632AtGenExpress: Developmental series (flowers and pollen)
245.7100.0GSM131577ATGE_31_B2GSE5632AtGenExpress: Developmental series (flowers and pollen)
234.1100.0E-MEXP-1592-raw-cel-1617526856
232.3100.0GSM131576ATGE_31_A2GSE5632AtGenExpress: Developmental series (flowers and pollen)
202.1100.0E-MEXP-1592-raw-cel-1617526984
184.0100.0E-MEXP-1592-raw-cel-1617526816
177.8100.0E-MEXP-1592-raw-cel-1617526888
169.8100.0E-MEXP-1592-raw-cel-1617526912
161.999.9E-MEXP-1592-raw-cel-1617526920
159.199.9E-MEXP-1592-raw-cel-1617526848
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.694e-144511At4g00040828224chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, biosynthetic process, metabolic process;C:unknown;PBOFC.G.S.X.
0.101e-242At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFC.G.S.X.
0.016e-136At5g20170832140unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFC.G.S.X.
0.026e-136At5g45090834541AtPP2-A7 (Phloem protein 2-A7)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PC.G.S.X.
0.026e-136At4g31150829243endonuclease V family proteinF:endonuclease activity;P:DNA repair;C:cellular_component unknown;BAOMPFC.G.S.X.
0.016e-136At2g38185818397zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:unknown;MOPVFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-550Glycine maxGma.5579.1.S1_atAW119360--2e-12At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.053e-136Hordeum vulgareContig19099_atContig19099--4e-4At4g00040chalcone and stilbene synthase family proteinC.G.S.X.
0.081e-346Oryza sativaOs10g0484800D50576.1--8e-4At1g02050chalcone and stilbene synthase family proteinC.G.S.X.
0.462e-1171Populus trichocarpaPtpAffx.221055.1.S1_atpmrna37614chs-like protein-1e-11At1g02050chalcone and stilbene synthase family proteinC.G.S.X.
0.094e-550Triticum aestivumTa.2815.3.S1_a_atCA593831--2e-5At1g02050chalcone and stilbene synthase family proteinC.G.S.X.
0.235e-1787Vitis vinifera1610872_atCB969190hypothetical protein LOC100259793-1e-16At1g02050chalcone and stilbene synthase family proteinC.G.S.X.
0.031e-344Zea maysZm.3804.1.S1_atAW061673chalcone synthase G-3e-3At4g34850chalcone and stilbene synthase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010584The formation of the pollen exine. The reticulate pollen wall pattern consists of two layers, exine and intine.
CGO:0009699The chemical reactions and pathways resulting in the formation of aromatic derivatives of trans-cinnamic acid.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00061Link to KaPPA-View 4Flavonoids biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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