CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g01900

Gene name SBTI1.1

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.53 68.6 At1g01900 839318 SBTI1.1 Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide. S.X. H.G.
0.97 97.6 At5g12460 831121 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PFMO S.X. H.G.
0.93 96.4 At1g50650 841487 stigma-specific Stig1 family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPFOM S.X. H.G.
0.93 96.4 At1g68510 843180 LBD42 (LOB DOMAIN-CONTAINING PROTEIN 42) F:unknown;P:biological_process unknown;C:unknown;PF S.X. H.G.
0.93 96.4 At1g71250 843466 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.93 96.4 At1g71120 843452 GLIP6 Contains lipase signature motif and GDSL domain. S.X. H.G.
0.93 96.4 At3g08900 820039 RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells. S.X. H.G.
0.93 96.4 At5g03810 831715 carboxylesterase/ hydrolase, acting on ester bonds / lipase F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM S.X. H.G.
0.90 95.1 At1g15150 838080 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA S.X. H.G.
0.90 95.1 At2g14690 815957 endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds Encodes a putative glycosyl hydrolase family 10 protein (xylanase). S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
689.4 100.0 GSM232888 Wt.4-3.240 GSE9201 Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
558.2 100.0 GSM232886 Wt.4-3.90 GSE9201 Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
547.0 100.0 GSM232885 Wt.3-1.90 GSE9201 Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
485.6 100.0 GSM232887 Wt.3-1.240 GSE9201 Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
301.5 100.0 GSM311290 Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
299.9 100.0 E-MEXP-432-raw-cel-590864395
245.5 100.0 E-MEXP-432-raw-cel-590864409
193.1 100.0 GSM311289 Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
76.7 99.9 E-MEXP-432-raw-cel-590864447
70.7 99.9 GSM131693 ATGE_78_F GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e-2 42 At3g14067 820621 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, plasma membrane, vacuole, plant-type cell wall;BPOFAM C.G. S.X.
0.01 3e-1 38 At5g67330 836868 ATNRAMP4 Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. C.G. S.X.
0.01 3e-1 38 At5g62280 836349 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 3e-1 38 At4g34610 829613 BLH6 (BELL1-LIKE HOMEODOMAIN 6) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFOB C.G. S.X.
0.01 3e-1 38 At1g17210 838292 zinc ion binding F:zinc ion binding;P:unknown;C:cytosol, nucleus, phragmoplast;OMPFBA C.G. S.X.
0.01 1e+0 36 At5g45650 834605 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.01 1e+0 36 At5g45640 834604 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPFOMA C.G. S.X.
0.01 1e+0 36 At5g63160 836437 BT1 (BTB AND TAZ DOMAIN PROTEIN 1) BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 38 Glycine max GmaAffx.92139.1.S1_x_at CF807864 - - 9e-5 At2g04160 AIR3 C.G. S.X.
0.02 4e-2 40 Hordeum vulgare Contig8307_s_at Contig8307 - - 4e-4 At5g11940 subtilase family protein C.G. S.X.
0.02 1e-5 54 Oryza sativa Os05g0368700 AK064686.1 - Subtilase family protein 2e-6 At1g01900 SBTI1.1 C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.77780.1.A1_at CK094923 - - 2e+0 At5g65410 HB25 (HOMEOBOX PROTEIN 25) C.G. S.X.
0.02 2e-5 52 Triticum aestivum Ta.10200.2.S1_at CA647779 - - 3e+0 At2g35345 unknown protein C.G. S.X.
0.02 6e-3 42 Vitis vinifera 1619687_at CD798741 hypothetical protein LOC100242388 - 2e+0 At5g53880 unknown protein C.G. S.X.
0.02 8e-3 42 Zea mays Zm.18272.1.A1_at CO523058 - - 2e+0 At1g54445 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
L GO:0043086 Any process that stops or reduces the activity of an enzyme.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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