Gene omics information

Query gene ID At1g01510
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At1g01510839401AN (ANGUSTIFOLIA)Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction.S.X.H.G.
0.6378.1At2g45700819178sterile alpha motif (SAM) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBAS.X.H.G.
0.6378.1At4g39680830123SAP domain-containing proteinF:DNA binding, nucleic acid binding;P:biological_process unknown;C:cytosol, nucleus, chloroplast;MPOFBVAS.X.H.G.
0.5873.8At2g20000816519HBT (HOBBIT)Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.S.X.H.G.
0.5570.6At1g18450838425ATARP4Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.S.X.H.G.
0.5570.6At4g32551829390LUG (LEUNIG)LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.S.X.H.G.
0.5368.6At5g51660835240CPSF160F:nucleic acid binding;P:mRNA cleavage, mRNA polyadenylation;C:nucleus;MFPOS.X.H.G.
0.5267.4At4g38750830030unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5267.4At3g04610819619FLK (flowering locus KH domain)F:RNA binding, nucleic acid binding;P:positive regulation of flower development;C:nucleus;MOPFVBS.X.H.G.
0.5267.4At4g37210829875tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFOPBVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.999.7GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
28.299.7GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
17.299.5GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.799.3GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
12.799.3GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
12.799.3GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.016e-240At1g49650841389cell death associated protein-relatedF:hydrolase activity;P:metabolic process;C:unknown;BOPFMAVC.G.S.X.
0.012e-138At5g22310832291unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAVC.G.S.X.
0.029e-136Atmg00450--hypothetical proteinC.G.S.X.
0.019e-136At5g24050832470DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PC.G.S.X.
0.019e-136At5g50270835092F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.019e-136At2g31770817734zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVC.G.S.X.
0.014e+034Atcg01130--hypothetical proteinC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.225e-34147Glycine maxGmaAffx.63439.1.S1_atBQ628576--3e-34At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.038e-652Hordeum vulgareContig15294_atContig15294--8e-6At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.188e-46186Oryza sativaOs03g0126100AK111921.1-C-terminal binding protein3e-46At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.134e-757Populus trichocarpaPtpAffx.92673.1.S1_atCK092094hypothetical protein-1e-7At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.011e+036Triticum aestivumTa.4830.3.S1_x_atCA701400--7e-2At1g35170-C.G.S.X.
0.024e+032Vitis vinifera1619223_s_atCB005867hypothetical protein LOC100249279-3e-41At3g43190SUS4C.G.S.X.
0.016e+032Zea maysZmAffx.283.1.A1_atAI670414--3e+0At3g23175lesion inducing protein-relatedC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0000226A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
XGO:0009965The process by which the anatomical structures of the leaf are generated and organized. Morphogenesis pertains to the creation of form.
XGO:0042814Polarized growth from one end of a cell.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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