Gene omics information

Query gene ID At1g01340
Gene name ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9095.1At1g01340838832ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10)member of Cyclic nucleotide gated channel familyS.X.H.G.
0.8592.4At1g70590843396F-box family proteinF:binding;P:biological_process unknown;C:chloroplast;BOFMPVS.X.H.G.
0.8190.4At3g07020819887UDP-glucose:sterol glucosyltransferase (UGT80A2)F:transferase activity, transferring glycosyl groups;P:lipid glycosylation, carbohydrate metabolic process, metabolic process;C:plasma membrane, membrane;BMFPOVS.X.H.G.
0.8190.4At4g02730828189transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFOPBAVS.X.H.G.
0.7989.1At4g31420829269zinc finger (C2H2 type) family proteinF:transcription factor activity;P:regulation of transcription;C:intracellular;MFOPS.X.H.G.
0.7989.1At5g54280835516ATM2 (ARABIDOPSIS THALIANA MYOSIN 2)Type VII myosin geneS.X.H.G.
0.7989.1At4g32440829379agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:unknown;PS.X.H.G.
0.7788.0At3g12140820389emsy N terminus domain-containing protein / ENT domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.7788.0At5g05130830395SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinF:in 7 functions;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.7687.4At3g07400819928lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;PFOMBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
357.5100.0E-ATMX-35-raw-cel-1574334832
351.2100.0E-ATMX-35-raw-cel-1574334816
216.2100.0E-ATMX-35-raw-cel-1574334800
210.2100.0GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
187.2100.0GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
53.099.8E-MEXP-828-raw-cel-1156922572
52.399.8E-MEXP-828-raw-cel-1156922368
50.799.8E-MEXP-828-raw-cel-1156922342
37.499.7E-MEXP-828-raw-cel-1156922613
34.299.7E-MEXP-828-raw-cel-1156922905
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.670751At4g01010826427ATCNGC13member of Cyclic nucleotide gated channel familyC.G.S.X.
0.196e-33143At2g46430819251ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistanceC.G.S.X.
0.108e-1169At2g46440819252ATCNGC11 (CYCLIC NUCLEOTIDE-GATED CHANNELS)Member of Cyclic nucleotide gated channel family. Positive regulator of resistance against avirulent fungal pathogen.C.G.S.X.
0.083e-1067At5g53130835393CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.045e-654At1g19780838566ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.063e-448At2g46450819253ATCNGC12Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner.C.G.S.X.
0.052e-242At4g30560829179ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.042e-242At3g48010823956ATCNGC16member of Cyclic nucleotide gated channel familyC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-346Glycine maxGmaAffx.51351.1.S1_atBQ297066--7e-20At5g53130CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)C.G.S.X.
0.052e-963Hordeum vulgareContig14052_atContig14052--4e-10At5g53130CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)C.G.S.X.
0.056e-448Oryza sativaOs02g0255000AK112041.1-Cyclic nucleotide-gated ion channel 1 (AtCNGC1)(Cyclic nucleotide-and calmodulin-regulated ion channel1)2e-6At3g48010ATCNGC16C.G.S.X.
0.192e-1275Populus trichocarpaPtpAffx.224250.1.S1_atpmrna42635hypothetical protein-1e-12At1g01340ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10)C.G.S.X.
0.025e-344Triticum aestivumTaAffx.77794.1.S1_atCA742726--8e-11At5g53130CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)C.G.S.X.
0.023e-136Vitis vinifera1615486_atCF415476hypothetical protein LOC100245706-7e-3At5g15410DND1 (DEFENSE NO DEATH 1)C.G.S.X.
0.017e-342Zea maysZm.8828.1.A1_atBM075809hypothetical protein LOC100191533-1e+0At3g63095-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006811The directed movement of charged atoms or small charged molecules into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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