Gene omics information

Query gene ID At1g01190
Gene name CYP78A8
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At1g01190839233CYP78A8member of CYP78AS.X.H.G.
0.7586.9At3g54040824571photoassimilate-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7586.9At2g28960817445leucine-rich repeat protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.7083.5At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)S.X.H.G.
0.7083.5At3g51350824298aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAVS.X.H.G.
0.6982.9At4g31875829317unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6680.1At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAS.X.H.G.
0.6680.1At5g45080834539AtPP2-A6 (Phloem protein 2-A6)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.6579.6At2g28990817448leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.6579.6At4g14630827113GLP9 (GERMIN-LIKE PROTEIN 9)germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.599.9GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
82.699.9GSM131402AtGen_6-7422_UV-Bstress-Roots-6.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)
79.299.9GSM142640MC002_ATH1_A6.3-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
57.599.8GSM131401AtGen_6-7421_UV-Bstress-Roots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.182e-26121At2g46660819278CYP78A6member of CYP78AC.G.S.X.
0.204e-21103At3g61880825361CYP78A9 (CYTOCHROME P450 78A9)Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.C.G.S.X.
0.041e-861At1g13710837932CYP78A5member of CYP78AC.G.S.X.
0.032e-448At5g09970830858CYP78A7member of CYP78AC.G.S.X.
0.042e-448At1g74110843751CYP78A10member of CYP78AC.G.S.X.
0.025e-240At4g15380827204CYP705A4member of CYP705AC.G.S.X.
0.018e-136At5g52400835316CYP715A1member of CYP715AC.G.S.X.
0.018e-136At5g39350833931pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMFBAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-1789Glycine maxGma.138.1.S1_atAF022463.1--4e-18At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.031e-138Hordeum vulgareHU13P05r_atHU13P05r--1e+0At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.077e-1273Oryza sativaOs07g06037009635.m04126-E-class P450, group I family protein4e-12At1g01190CYP78A8C.G.S.X.
0.132e-242Populus trichocarpaPtp.325.1.A1_s_atCK088352cytochrome P450-7e-3At1g01190CYP78A8C.G.S.X.
0.033e-344Triticum aestivumTaAffx.91903.1.A1_atBJ294119--6e-2At4g13770CYP83A1 (CYTOCHROME P450 83A1)C.G.S.X.
0.111e-654Vitis vinifera1622687_atCB344274hypothetical protein LOC100258159-2e-6At1g01190CYP78A8C.G.S.X.
0.025e+032Zea maysZm.5789.13.A1_a_atAI670670hypothetical protein LOC100192516-8e-7At1g43170ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00903Link to KEGG PATHWAYLimonene and pinene degradation
00945Link to KEGG PATHWAYStilbenoid, diarylheptanoid and gingerol biosynthesis
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