Gene omics information

Query gene ID At1g01120
Gene name KCS1 (3-KETOACYL-COA SYNTHASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.157.8At1g01120839395KCS1 (3-KETOACYL-COA SYNTHASE 1)Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.S.X.H.G.
0.2522.6At1g07720837286KCS3 (3-KETOACYL-COA SYNTHASE 3)Encodes KCS3, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
0.2217.5At4g24510828553CER2 (ECERIFERUM 2)Involved in C28 to C30 fatty acid elongation.S.X.H.G.
0.1811.4At5g20270832149HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1)heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptorsS.X.H.G.
0.146.8At4g01680826853MYB55 (myb domain protein 55)Encodes a putative transcription factor (MYB55).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.899.8GSM131204AtGen_D-38_3-AL_REP3_ATH1GSE5617AtGenExpress: Light treatments
38.199.8GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatments
36.099.7GSM131205AtGen_D-39_3-UL_REP3_ATH1GSE5617AtGenExpress: Light treatments
32.399.7GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatments
31.799.7GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatments
31.699.7GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatments
31.499.7GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatments
30.399.7GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatments
29.899.7GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
29.799.7GSM131185AtGen_D-18_2-FL_REP2_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.182e-23111At5g43760834398KCS20 (3-KETOACYL-COA SYNTHASE 20)Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.201e-21105At1g04220839578KCS2 (3-KETOACYL-COA SYNTHASE 2)Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.114e-1273At4g34510829602KCS17 (3-KETOACYL-COA SYNTHASE 17)Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.034e-1273At1g19440838528KCS4 (3-KETOACYL-COA SYNTHASE 4)Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.069e-1065At4g34250829574KCS16 (3-KETOACYL-COA SYNTHASE 16)Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.119e-1065At3g10280820190KCS14 (3-KETOACYL-COA SYNTHASE 14)Encodes KCS14, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.109e-1065At2g46720819284KCS13 (3-KETOACYL-COA SYNTHASE 13)Encodes KCS13, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.105e-859At2g16280816124KCS9 (3-KETOACYL-COA SYNTHASE 9)Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.062e-757At4g34520829603KCS18Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.211e-21105Glycine maxGmaAffx.73570.1.S1_atBG316320--4e-22At1g01120KCS1 (3-KETOACYL-COA SYNTHASE 1)C.G.S.X.
0.065e-1375Hordeum vulgareContig6411_atContig6411--1e-14At1g04220KCS2 (3-KETOACYL-COA SYNTHASE 2)C.G.S.X.
0.124e-448Oryza sativaOs06g0598800AK101377.1-Fatty acid elongase 1-like protein1e-28At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)C.G.S.X.
0.186e-21103Populus trichocarpaPtpAffx.101967.1.A1_atCV243030--2e-21At1g01120KCS1 (3-KETOACYL-COA SYNTHASE 1)C.G.S.X.
0.071e-861Triticum aestivumTaAffx.38653.1.S1_atBQ240362--9e-6At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)C.G.S.X.
0.144e-961Vitis vinifera1612105_atCF415846hypothetical protein LOC100263066-4e-19At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
0.059e-857Zea maysZm.295.1.A1_atAI065608fae2 protein-2e-20At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0009416A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
XGO:0010025The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids.
XGO:0000038The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater.
XGO:0030497The elongation of a fatty acid chain by the sequential addition of two-carbon units.
XGO:0042335The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00040Link to KaPPA-View 4Fatty acid elongation and wax biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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