Gene omics information

Query gene ID	AFFX-Vvi-actin-3_c4_s_at
Gene name	actin 1
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	AFFX-Vvi-actin-3_c4_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.80	93.6	AFFX-Vvi-actin-3_c2_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.77	92.3	AFFX-Vvi-actin-3_c6_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.77	92.3	1606368_s_at	CF208516	actin 1	-	0	At5g09810	ACT7 (ACTIN 7)	S.X.	H.G.	Please select
0.77	92.3	AFFX-Vvi-actin-3_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.67	87.9	1609191_s_at	CB978023	hypothetical protein LOC100258056	-	0	At5g26751	ATSK11	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
1.9	87.2	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.5	81.7	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.5	81.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.5	81.7	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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