CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622867_s_at

Gene name hypothetical protein LOC100264026

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1622867_s_at CB342248 hypothetical protein LOC100264026 - 7e-72 At5g13650 elongation factor family protein S.X. H.G.
0.73 90.8 1613473_at CF515343 hypothetical protein LOC100252456 - 6e-7 At5g64940 ATATH13 S.X. H.G.
0.60 81.9 1618001_at CB977396 hypothetical protein LOC100252456 - 1e-87 At5g64940 ATATH13 S.X. H.G.
0.46 66.5 1614178_at CD714991 - - 8e-106 At2g39730 RCA (RUBISCO ACTIVASE) S.X. H.G.
0.44 64.1 1609721_at CA813771 hypothetical protein LOC100250132 - 4e-14 At5g50100 - S.X. H.G.
0.32 43.1 1620113_at CB339407 hypothetical protein LOC100257414 - 2e-105 At1g62750 SCO1 (SNOWY COTYLEDON 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.6 98.9 GSM147701 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 30
5.3 98.2 GSM147678 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 7
5.3 98.2 GSM147689 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 18
4.7 97.7 GSM147695 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 24
4.6 97.6 GSM147700 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 29
4.4 97.3 GSM147707 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 36
4.2 97.1 GSM147688 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 17
4.0 96.7 GSM147684 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 13
3.9 96.6 GSM322366 genotype: Chardonnay - disease type: Healthy - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.8 96.4 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 34 1620821_at CD008586 hypothetical protein LOC100242952 - 9e-14 At5g15900 unknown protein C.G. S.X.
0.02 8e-1 34 1617062_at CD008586 - - 9e-14 At5g15900 unknown protein C.G. S.X.
0.01 8e-1 34 1607774_at CB342960 hypothetical protein LOC100262553 - 7e+0 At3g14080 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative C.G. S.X.
0.01 3e+0 32 1622715_s_at CA809281 hypothetical protein LOC100246378 - 3e-68 At1g12900 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) C.G. S.X.
0.02 3e+0 32 1622697_at CF404500 - - 1e+0 At1g31160 zinc-binding protein, putative / protein kinase C inhibitor, putative C.G. S.X.
0.01 3e+0 32 1621934_at CF210016 - - 4e-1 At3g07600 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 3e+0 32 1620037_at CK138193.1 - - 1e+0 At5g02750 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 3e+0 32 1617965_at CB349538 hypothetical protein LOC100266380 - 3e-14 At1g59650 CW14 C.G. S.X.
0.01 3e+0 32 1611305_at CD797859 hypothetical protein LOC100259285 - 1e-13 At2g43640 signal recognition particle 14 kDa family protein / SRP14 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 7e-72 272 Arabidopsis thaliana At5g13650 831209 elongation factor family protein F:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:chloroplast, chloroplast stroma;BOMFPA - - - C.G. S.X.
0.58 0 638 Glycine max Gma.2012.1.S1_at BI471315 - - 2e-84 At5g13650 elongation factor family protein C.G. S.X.
0.24 7e-24 111 Hordeum vulgare Contig10271_at Contig10271 - - 3e-5 At5g13650 elongation factor family protein C.G. S.X.
0.29 4e-13 77 Oryza sativa Os02g0285800 AK099035.1 - GTP-binding protein TypA family protein 4e-62 At5g13650 elongation factor family protein C.G. S.X.
0.40 2e-119 430 Populus trichocarpa Ptp.4833.1.S1_at CV236741 hypothetical protein - 3e-42 At5g13650 elongation factor family protein C.G. S.X.
0.25 4e-24 113 Triticum aestivum TaAffx.4642.1.S1_at CA680111 - - 4e-5 At5g13650 elongation factor family protein C.G. S.X.
0.02 5e+0 32 Zea mays Zm.5496.1.S1_at AY105645.1 hypothetical protein LOC100275844 - 4e+0 At2g25650 DNA-binding storekeeper protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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