Gene omics information

Query gene ID 1622854_s_at
Gene name ripening-related protein-like
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8394.61622854_s_atBQ798002ripening-related protein-like-2e+0At4g09820TT8 (TRANSPARENT TESTA 8)S.X.H.G.
0.8394.61619339_s_atCF215343ripening-related protein-like-3e+0At2g23780zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5375.21611614_atCB978170hypothetical protein LOC100253481-4e-2At3g17630ATCHX19 (CATION/H+ EXCHANGER 19)S.X.H.G.
0.5072.71615257_atCB972713hexose transporter-like-6e-12At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)S.X.H.G.
0.4767.71619667_atBQ797924similar to DRT100-8e-1At5g06860PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)S.X.H.G.
0.2734.01610428_atCD012983hypothetical protein LOC100263040-2e-4At1g32090early-responsive to dehydration protein-related / ERD protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.299.7GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
9.999.6GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
9.799.6GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
9.599.6GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
9.099.5GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
8.999.5GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
8.899.5GSM287892Pink soft berry C11 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
7.799.3GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
7.599.2GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
7.499.2GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.272e-933391615776_atBQ794648ripening-related protein-like-2e-3At1g15840unknown proteinC.G.S.X.
0.042e+0301607003_atCF607352--4e+0At3g47650bundle-sheath defective protein 2 family / bsd2 familyC.G.S.X.
0.049e+0281622308_atCF210289hypothetical protein LOC100263876-4e+0At4g18425unknown proteinC.G.S.X.
0.029e+0281622222_atCF513193hypothetical LOC100241693-2e-4At5g15630IRX6C.G.S.X.
0.029e+0281618863_atCF208339hypothetical protein LOC100254505-3e-9At3g23640HGL1 (heteroglycan glucosidase 1)C.G.S.X.
0.029e+0281616910_atCB968953hypothetical protein LOC100263737-2e+0At5g26210AL4 (ALFIN-LIKE 4)C.G.S.X.
0.039e+0281616840_atCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)C.G.S.X.
0.029e+0281614526_atCD711134--4e-20At4g23850long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetaseC.G.S.X.
0.029e+0281612176_atCF212948hypothetical protein LOC100250907-5e-23At3g17940aldose 1-epimerase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+032Arabidopsis thalianaAt4g09820826571TT8 (TRANSPARENT TESTA 8)TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development.---C.G.S.X.
0.071e+130Glycine maxGmaAffx.75038.1.A1_atCD396279--3e+0At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)C.G.S.X.
0.059e-132Hordeum vulgareContig25112_atContig25112--5e-2At2g37760aldo/keto reductase family proteinC.G.S.X.
0.094e+032Oryza sativaOs05g04671009633.m03635--1e+0At3g44020thylakoid lumenal P17.1 proteinC.G.S.X.
0.041e+130Populus trichocarpaPtpAffx.2948.2.S1_atCK319438hypothetical protein-2e-5At4g14780protein kinase, putativeC.G.S.X.
0.048e+030Triticum aestivumTa.10382.1.S1_atBJ251111--4e+0At5g04850VPS60.2C.G.S.X.
0.031e+128Zea maysZm.3343.2.S1_a_atCA399684hypothetical protein LOC100191317-1e-25At5g06360ribosomal protein S8e family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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