CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622676_s_at

Gene name hypothetical protein LOC100247010

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 77.3 1622676_s_at CF212246 hypothetical protein LOC100247010 - 3e-16 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) S.X. H.G.
0.83 94.6 1621792_at CF414727 hypothetical protein LOC100249673 - 1e-3 At1g75080 BZR1 (BRASSINAZOLE-RESISTANT 1) S.X. H.G.
0.60 81.9 1617584_s_at CF211103 hypothetical protein LOC100265140 - 4e+0 At5g40620 unknown protein S.X. H.G.
0.60 81.9 1611032_at CF206614.1 - - 9e-1 Atmg01370 - S.X. H.G.
0.50 72.7 1617441_at CF074656 hypothetical protein LOC100246691 - 1e-13 At3g51850 CPK13 S.X. H.G.
0.40 57.7 1618470_at CD012303 hypothetical protein LOC100253407 - 2e+0 At3g30460 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.9 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436420 V. riparia (VR, PI588259) SD, 13h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436365 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436421 V. riparia (VR, PI588259) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 5e-25 113 1610018_at CF514810 hypothetical protein LOC100246937 - 4e-10 At1g43640 AtTLP5 (TUBBY LIKE PROTEIN 5) C.G. S.X.
0.15 1e-19 95 1620298_at CF513792 hypothetical protein LOC100253937 - 1e-18 At1g47270 AtTLP6 (TUBBY LIKE PROTEIN 6) C.G. S.X.
0.13 1e-16 85 1614602_at CB004149 hypothetical protein LOC100244335 - 1e-32 At2g47900 AtTLP3 (TUBBY LIKE PROTEIN 3) C.G. S.X.
0.12 1e-13 75 1622828_at CF209348 hypothetical protein LOC100261485 - 1e-3 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) C.G. S.X.
0.18 1e-13 75 1615755_s_at CF209492 hypothetical protein LOC100258055 - 5e-9 At2g47900 AtTLP3 (TUBBY LIKE PROTEIN 3) C.G. S.X.
0.18 1e-13 75 1608236_at CF209492 hypothetical protein LOC100258055 - 5e-9 At2g47900 AtTLP3 (TUBBY LIKE PROTEIN 3) C.G. S.X.
0.10 6e-9 59 1611991_at CF200778.1 - - 2e-7 At3g06380 ATTLP9 (TUBBY-LIKE PROTEIN 9) C.G. S.X.
0.03 3e-1 34 1612431_at CA810329 - - 1e+0 At2g16720 MYB7 (MYB DOMAIN PROTEIN 7) C.G. S.X.
0.03 1e+0 32 1612670_at CB343506 - - 3e-4 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 3e-16 85 Arabidopsis thaliana At1g25280 839112 AtTLP10 (TUBBY LIKE PROTEIN 10) Member of TLP family - - - C.G. S.X.
0.37 2e-52 206 Glycine max Gma.6746.1.A1_at BI969541 - - 1e-9 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) C.G. S.X.
0.12 4e-2 38 Hordeum vulgare Contig20499_at Contig20499 - - 1e-15 At1g53320 AtTLP7 (TUBBY LIKE PROTEIN 7) C.G. S.X.
0.07 2e-6 54 Oryza sativa Os.18696.1.S1_at - - - 0 C.G. S.X.
0.19 2e-24 113 Populus trichocarpa PtpAffx.26405.2.A1_at BP935671 f-box family protein /// hypothetical protein /// f-box family protein - 8e-11 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) C.G. S.X.
0.14 1e-6 54 Triticum aestivum Ta.6212.2.S1_at CA639497 - - 1e-6 At2g47900 AtTLP3 (TUBBY LIKE PROTEIN 3) C.G. S.X.
0.11 5e-10 63 Zea mays Zm.1386.1.S1_at CF623901 hypothetical protein LOC100191903 - 2e-10 At1g43640 AtTLP5 (TUBBY LIKE PROTEIN 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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