CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622623_at

Gene name hypothetical protein LOC100258799

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 77.3 1622623_at CF514619 hypothetical protein LOC100258799 - 1e+0 At1g64680 unknown protein S.X. H.G.
0.40 57.7 1619359_at CF404659 hypothetical protein LOC100258799 - 3e-1 At5g24910 CYP714A1 S.X. H.G.
0.38 53.6 1608099_at CD800698 brassinosteroid-6-oxidase - 5e-6 At3g30180 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) S.X. H.G.
0.33 45.7 1616880_at CF209215 hypothetical protein LOC100258571 - 3e-1 At4g37980 ELI3-1 (ELICITOR-ACTIVATED GENE 3-1) S.X. H.G.
0.12 12.1 1613831_at CD801016 hypothetical protein LOC100247537 - 1e-10 At4g37970 CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6) S.X. H.G.
0.11 11.3 1611613_at BQ796771 hypothetical protein LOC100256970 - 3e+0 At4g15630 integral membrane family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.3 100.0 GSM287873 Green hard berry B9 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
18.5 99.9 GSM287877 Green hard berry B12 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
11.7 99.7 GSM287866 Green hard berry B21 from plant 1 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
11.2 99.7 GSM287867 Green hard berry C1 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
11.0 99.7 GSM287869 Green hard berry C3 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
10.1 99.6 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
8.8 99.5 GSM287875 Green hard berry C17 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
8.2 99.4 GSM287871 Green hard berry C4 from plant 1 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
7.2 99.1 GSM287879 Green hard berry C19 from plant 2 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
6.7 99.0 GSM287885 Green soft berry A22 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 34 1614521_at CB972210 hypothetical protein LOC100259570 - 4e-1 At5g67490 unknown protein C.G. S.X.
0.03 3e-1 34 1614012_at CF415366 hypothetical protein LOC100254260 - 3e-1 At5g54980 integral membrane family protein C.G. S.X.
0.03 1e+0 32 1620553_at CF211773 hypothetical protein LOC100265994 - 4e-28 At3g58140 phenylalanyl-tRNA synthetase class IIc family protein C.G. S.X.
0.03 1e+0 32 1615244_at BQ799114 - - 4e+0 At5g16390 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1) C.G. S.X.
0.03 1e+0 32 1610907_at CD718614 - - 3e-1 At2g46160 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 1e+0 32 1608903_at CF516993 hypothetical protein LOC100245579 - 9e-10 At3g14100 oligouridylate-binding protein, putative C.G. S.X.
0.03 1e+0 32 1607067_at CD718614 hypothetical protein LOC100241330 - 3e-1 At2g46160 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 5e+0 30 1622091_at CD802360 hypothetical protein LOC100242189 - 4e+0 At2g01360 - C.G. S.X.
0.02 5e+0 30 1621989_at CD006576 - - 3e-21 At4g19230 CYP707A1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g64680 842776 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PBO - - - C.G. S.X.
0.10 1e-7 57 Glycine max GmaAffx.15208.1.S1_at BU549984 - - 2e+0 At5g24900 CYP714A2 C.G. S.X.
0.03 2e+0 32 Hordeum vulgare S0001000018F11F1_x_at S0001000018F11F1 - - 8e-1 At1g06850 AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52) C.G. S.X.
0.04 3e-2 40 Oryza sativa Os12g0638800 CF311252 - HI0933-like protein family protein 2e-5 At5g39940 - C.G. S.X.
0.24 3e-20 99 Populus trichocarpa PtpAffx.215579.1.S1_s_at pmrna29856 cytochrome P450 - 1e-5 At5g24910 CYP714A1 C.G. S.X.
0.06 7e-2 38 Triticum aestivum TaAffx.64667.1.S1_at BJ282030 - - 5e-6 At5g24910 CYP714A1 C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.816.1.A1_at AI770437 - - 3e+0 At3g12977 DNA binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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