Gene omics information

Query gene ID	1622364_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1622364_at	CF606509	-	-	2e+0	At5g62750	unknown protein	S.X.	H.G.	Please select
0.80	93.6	1609422_a_at	CA816734	-	-	2e-12	Atcg00050	-	S.X.	H.G.	Please select
0.80	93.6	1618379_s_at	CB343512	-	-	1e+0	At3g49115	unknown protein	S.X.	H.G.	Please select
0.63	84.3	1617605_at	CF513977	-	-	0	Atcg00680	-	S.X.	H.G.	Please select
0.59	80.6	1622410_s_at	CB344360	-	-	5e-9	Atcg00050	-	S.X.	H.G.	Please select
0.56	79.4	1622744_at	CF201679.1	similar to Os01g0789500 /// similar to ribosomal protein S3	-	2e-42	Atcg00820	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.4	99.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
9.0	99.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
8.3	99.4	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
8.3	99.4	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
7.9	99.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
7.3	99.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
7.1	99.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
6.4	98.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
6.3	98.8	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
6.3	98.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	5e-161	565	1612889_s_at	CF512929	-	-	7e-1	At1g73490	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.03	1e-1	36	1619644_at	CF516971	-	-	3e-1	At2g02280	AtPP2-B4 (Phloem protein 2-B4)	C.G.	S.X.	Please select
0.03	5e-1	34	1613413_at	BQ799171	hypothetical protein LOC100261579	-	7e-2	At2g04795	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	1608152_at	CF414314	hypothetical protein LOC100259521	-	3e+0	At3g56710	SIB1 (SIGMA FACTOR BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.02	2e+0	32	1621116_at	CB836425	-	-	2e+0	At5g36001	-	C.G.	S.X.	Please select
0.02	2e+0	32	1619476_at	CB836997	-	-	6e+0	At5g43185	Expressed protein	C.G.	S.X.	Please select
0.02	2e+0	32	1613924_at	CB342218	-	-	4e-1	At1g76260	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.03	2e+0	32	1612157_at	CF213489	hypothetical protein LOC100262045	-	1e-9	At5g05390	LAC12 (laccase 12)	C.G.	S.X.	Please select
0.03	2e+0	32	1611662_at	CD800398	hypothetical protein LOC100252443	-	2e+0	At5g39010	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At5g62750	836396	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-2	40	Glycine max	HgAffx.18800.1.S1_at	CA940380	-	-	4e+0	At4g02850	phenazine biosynthesis PhzC/PhzF family protein	C.G.	S.X.	Please select
0.03	5e-2	38	Hordeum vulgare	HVSMEm0007D17r2_at	HVSMEm0007D17r2	-	-	5e+0	At5g59050	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	36	Oryza sativa	Os.49617.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e-16	87	Populus trichocarpa	PtpAffx.21048.1.S1_at	CV255089	-	-	8e+0	At4g02830	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	36	Triticum aestivum	TaAffx.419.2.S1_at	CA671129	-	-	4e+0	At4g08950	EXO (EXORDIUM)	C.G.	S.X.	Please select
0.03	3e+0	32	Zea mays	Zm.4357.6.S1_x_at	BM332251	22kD alpha zein4	-	6e-2	At3g17668	ENA (ENHANCER OF ATNSI ACTIVITY)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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