CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622362_at

Gene name hypothetical protein LOC100254265

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1622362_at CD802017 hypothetical protein LOC100254265 - 6e-34 At2g25760 protein kinase family protein S.X. H.G.
0.91 98.8 1622541_at CB342787 hypothetical protein LOC100258249 - 4e-35 At5g12190 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.80 93.6 1621842_at CB968661 hypothetical protein LOC100256561 - 3e-33 At3g02420 unknown protein S.X. H.G.
0.56 79.4 1611617_at CF373170 hypothetical protein LOC100261039 - 3e-1 At4g12150 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.55 77.3 1616070_at BQ798090 hypothetical protein LOC100242617 - 3e-111 At2g27600 SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) S.X. H.G.
0.50 72.7 1618114_s_at CB915270 hypothetical protein LOC100243282 - 6e-1 At1g27610 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.8 93.4 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436366 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436382 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436365 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436385 Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.2 89.9 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e-7 54 1622553_a_at BQ797594 hypothetical protein LOC100267624 - 1e-34 At5g18190 protein kinase family protein C.G. S.X.
0.11 5e-4 44 1609424_at CD798745 hypothetical protein LOC100263956 - 7e-30 At3g13670 protein kinase family protein C.G. S.X.
0.02 2e+0 32 1614904_at CF372909 hypothetical protein LOC100250638 - 4e-16 At3g61140 FUS6 (FUSCA 6) C.G. S.X.
0.02 2e+0 32 1614782_at CB970893 hypothetical protein LOC100242015 - 2e-1 At4g18070 unknown protein C.G. S.X.
0.03 2e+0 32 1611360_s_at CF372855 hypothetical protein LOC100264047 - 8e+0 At5g54170 - C.G. S.X.
0.02 2e+0 32 1611008_at CF200658.1 hypothetical protein LOC100262509 - 9e-30 At1g57660 60S ribosomal protein L21 (RPL21E) C.G. S.X.
0.02 2e+0 32 1606847_at CB968652 hypothetical protein LOC100251390 - 4e-1 At3g52900 unknown protein C.G. S.X.
0.03 7e+0 30 1620124_at CD006098 - - 5e-2 At4g12410 auxin-responsive family protein C.G. S.X.
0.02 7e+0 30 1619091_at CF517410 hypothetical protein LOC100262799 - 7e-19 At5g23040 CDF1 (CELL GROWTH DEFECT FACTOR 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 6e-34 145 Arabidopsis thaliana At2g25760 817118 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MBOPFVA - - - C.G. S.X.
0.31 5e-35 149 Glycine max Gma.7378.1.S1_at BG359590 - - 1e-16 At2g25760 protein kinase family protein C.G. S.X.
0.23 2e-10 65 Hordeum vulgare Contig11330_at Contig11330 - - 2e-15 At3g03940 protein kinase family protein C.G. S.X.
0.17 2e-38 161 Oryza sativa Os01g0744300 NM_191171.1 - Casein kinase-like protein 4e-15 At2g25760 protein kinase family protein C.G. S.X.
0.31 1e-38 161 Populus trichocarpa PtpAffx.1460.1.S1_at CV241966 hypothetical protein - 1e-19 At2g25760 protein kinase family protein C.G. S.X.
0.18 2e-15 83 Triticum aestivum Ta.7089.1.S1_at CD872336 casein kinase-like protein - 2e-13 At3g13670 protein kinase family protein C.G. S.X.
0.18 2e-16 85 Zea mays Zm.14701.1.A1_at CB334376 - - 1e-25 At3g03940 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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