CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622304_at

Gene name hypothetical protein LOC100267709

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1622304_at CF513613 hypothetical protein LOC100267709 - 2e+0 At2g19740 60S ribosomal protein L31 (RPL31A) S.X. H.G.
0.80 93.6 1615118_at CF373171 hypothetical protein LOC100241584 - 1e+0 At4g36620 zinc finger (GATA type) family protein S.X. H.G.
0.67 87.9 1611804_at CF513259 hypothetical protein LOC100252436 - 1e-1 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein S.X. H.G.
0.53 75.2 1615124_at CF514122 hypothetical protein LOC100258563 - 8e-5 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.43 61.5 1622481_x_at CF568921 - - 3e-2 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) S.X. H.G.
0.36 50.7 1607851_at CF415102 hypothetical protein LOC100266538 - 9e-2 At1g04660 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.3 99.2 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.0 99.1 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.5 98.9 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.9 98.6 GSM436383 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.0 98.0 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.9 97.9 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.9 97.9 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436398 V. riparia (VR, PI588259) LD, 15h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436402 V. riparia (VR, PI588259) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436378 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 36 1620861_at CD721586 - - 5e+0 At1g06810 unknown protein C.G. S.X.
0.02 1e-1 36 1617101_at CD721586 - - 5e+0 At1g06810 unknown protein C.G. S.X.
0.02 6e-1 34 1622061_at CD798716 hypothetical protein LOC100264484 - 3e-10 At1g59820 ALA3 (Aminophospholipid ATPase3) C.G. S.X.
0.02 2e+0 32 1618074_s_at CB975671 hypothetical protein LOC100267870 - 3e-44 At4g26230 60S ribosomal protein L31 (RPL31B) C.G. S.X.
0.02 2e+0 32 1617457_at CD012455 hypothetical protein LOC100267543 - 5e+0 At5g02240 binding / catalytic/ coenzyme binding C.G. S.X.
0.03 2e+0 32 1616134_at CF516788 hypothetical protein LOC100264612 - 1e+0 At2g19760 PRF1 (PROFILIN 1) C.G. S.X.
0.02 2e+0 32 1615253_at CB837750 - - 1e+0 At3g49630 2-oxoacid-dependent oxidase, putative C.G. S.X.
0.02 2e+0 32 1614298_at CF403239 hypothetical protein LOC100256505 - 7e-40 At1g08465 YAB2 (YABBY2) C.G. S.X.
0.02 2e+0 32 1613640_at CD012455 - - 5e+0 At5g02240 binding / catalytic/ coenzyme binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At2g19740 816493 60S ribosomal protein L31 (RPL31A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, chloroplast, plasma membrane;MOPAFB - - - C.G. S.X.
0.05 7e-4 46 Glycine max Gma.8546.1.S1_at AW349424 - - 5e-1 At1g51090 heavy-metal-associated domain-containing protein C.G. S.X.
0.03 1e-2 40 Hordeum vulgare HV09H13u_at HV09H13u - - 8e-1 At2g37970 SOUL-1 C.G. S.X.
0.03 6e-2 40 Oryza sativa Os07g0164800 AK070973.1 - Hypothetical protein 2e-1 At1g22230 unknown protein C.G. S.X.
0.04 3e+0 34 Populus trichocarpa PtpAffx.790.1.A1_at CV273737 - - 3e-5 At2g20520 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6) C.G. S.X.
0.03 5e-1 36 Triticum aestivum Ta.23256.3.S1_at CA742970 - - 3e+0 At5g03750 - C.G. S.X.
0.02 3e+0 32 Zea mays ZmAffx.1111.1.A1_at AW231338 - - 8e-1 At4g00560 methionine adenosyltransferase regulatory beta subunit-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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