Gene omics information

Query gene ID	1622195_at
Gene name	hypothetical protein LOC100248937
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1622195_at	CB969266	hypothetical protein LOC100248937	-	3e-15	At4g07990	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.56	79.4	1619649_at	BQ793844	hypothetical protein LOC100259453	-	1e+0	At2g34860	EDA3 (embryo sac development arrest 3)	S.X.	H.G.	Please select
0.44	64.1	1620957_at	CB969381	hypothetical protein LOC100244062	-	8e-21	At2g43400	ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase)	S.X.	H.G.	Please select
0.27	34.0	1616408_a_at	CA809416	hypothetical protein LOC100251641	-	2e+0	At2g14935	LCR40 (Low-molecular-weight cysteine-rich 40)	S.X.	H.G.	Please select
0.16	16.7	1606432_at	CD013716	hypothetical protein LOC100242349	-	1e-4	At4g39690	unknown protein	S.X.	H.G.	Please select
0.11	11.3	1621023_at	CB920048	hypothetical protein LOC100258618	-	8e-27	At5g59140	SKP1 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.6	92.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.5	91.9	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-10	65	1621244_s_at	CD797552	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.03	2e-10	65	1606513_s_at	CB981864	similar to Stress-related protein	-	2e+0	At2g47780	rubber elongation factor (REF) protein-related	C.G.	S.X.	Please select
0.03	8e-10	63	1621663_at	CF211908	-	-	5e-1	At4g04650	-	C.G.	S.X.	Please select
0.03	8e-10	63	1621610_at	CF372731	-	-	8e-6	At4g28240	wound-responsive protein-related	C.G.	S.X.	Please select
0.04	8e-10	63	1609218_at	BM437324	-	-	3e-1	At4g40030	histone H3.2	C.G.	S.X.	Please select
0.04	3e-9	61	1618494_at	CF405291	hypothetical protein LOC100264126	-	7e-5	At1g18010	-	C.G.	S.X.	Please select
0.03	3e-9	61	1614437_at	CF406008	-	-	5e-1	At3g25882	NIMIN-2 (NIM1-INTERACTING 2)	C.G.	S.X.	Please select
0.04	3e-9	61	1614558_at	CF214381	hypothetical protein LOC100252287	-	1e-3	At1g09750	chloroplast nucleoid DNA-binding protein-related	C.G.	S.X.	Please select
0.03	3e-9	61	1608277_at	CA816391	hypothetical protein LOC100249980	-	3e-75	At4g12230	esterase/lipase/thioesterase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	3e-15	83	Arabidopsis thaliana	At4g07990	826304	DNAJ heat shock N-terminal domain-containing protein	F:heat shock protein binding;P:protein folding;C:unknown;BOMPFA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.23	2e-7	57	Glycine max	GmaAffx.79303.1.S1_at	AW595967	-	-	1e-18	At4g07990	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.06	5e-6	52	Hordeum vulgare	Contig14917_at	Contig14917	-	-	7e-4	At4g07990	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.07	1e-3	46	Oryza sativa	Os07g0124800	AK068837.1	-	Heat shock protein DnaJ, N-terminal domaincontaining protein	1e-1	At1g75550	glycine-rich protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	2e-35	151	Populus trichocarpa	PtpAffx.202008.1.S1_at	pmrna4003	hypothetical protein	-	3e-4	At4g07990	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-3	44	Triticum aestivum	Ta.11198.1.S1_at	BQ169601	-	-	3e+0	At2g26520	unknown protein	C.G.	S.X.	Please select
0.09	1e-9	63	Zea mays	Zm.12228.1.S1_at	BQ293557	heat shock protein binding protein	-	1e-5	At4g07990	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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