CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622167_at

Gene name hypothetical protein LOC100249144

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1622167_at CB007965 hypothetical protein LOC100249144 - 9e-5 At5g23410 - S.X. H.G.
0.77 92.3 1612831_s_at CF201533.1 H+-pyrophosphatase - 5e-9 At1g15690 AVP1 S.X. H.G.
0.67 87.9 1607488_at CF373706 hypothetical protein LOC100245682 - 1e+0 At3g06985 LCR44 (Low-molecular-weight cysteine-rich 44) S.X. H.G.
0.67 87.9 1612742_s_at CF372931 hypothetical protein LOC100260825 - 4e-3 At1g51600 TIFY2A S.X. H.G.
0.60 81.9 1611783_at BQ792690 hypothetical protein LOC100262520 - 1e+0 At2g43570 chitinase, putative S.X. H.G.
0.48 68.8 1606673_at CB005473 hypothetical protein LOC100253524 - 1e-13 At3g10620 ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.6 92.5 GSM147699 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 28
2.6 92.5 GSM147693 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 22
2.5 91.9 GSM147701 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 30
2.2 89.9 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
2.2 89.9 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
2.1 89.1 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
2.1 89.1 GSM147705 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 34
2.0 88.2 GSM147698 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation 27
2.0 88.2 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
1.9 87.2 GSM147675 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 4
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 1e-65 248 1613547_at CB341494 - - 2e-9 At5g57360 ZTL (ZEITLUPE) C.G. S.X.
0.02 1e-1 36 1615439_at CF213244 hypothetical protein LOC100257308 - 6e-23 At3g19450 ATCAD4 C.G. S.X.
0.02 2e+0 32 1618038_at CA818781 enhanced disease susceptibility 1 - 1e-10 At3g48090 EDS1 (enhanced disease susceptibility 1) C.G. S.X.
0.05 2e+0 32 1614760_at BQ792274 hypothetical protein LOC100255972 - 4e+0 At5g58390 peroxidase, putative C.G. S.X.
0.03 2e+0 32 1614515_at CF514073 hypothetical protein LOC100250710 - 4e+0 Atcg00360 - C.G. S.X.
0.03 2e+0 32 1613845_at BQ796489 hypothetical protein LOC100253787 - 3e+0 At5g01712 CPuORF48 (Conserved peptide upstream open reading frame 48) C.G. S.X.
0.02 2e+0 32 1612879_at BQ792341 hypothetical protein LOC100260024 - 2e+0 At5g02060 integral membrane protein, putative C.G. S.X.
0.03 2e+0 32 1609133_at CD800358 hypothetical protein LOC100250236 - 4e+0 At3g26880 self-incompatibility protein-related C.G. S.X.
0.01 6e+0 30 1622528_at CF515653 hypothetical protein LOC100259834 - 1e-11 At4g12290 amine oxidase/ copper ion binding / quinone binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 9e-5 48 Arabidopsis thaliana At5g23410 832407 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.28 4e-32 139 Glycine max Gma.17530.1.S1_at BG511122 - - 5e-5 At5g23410 - C.G. S.X.
0.15 5e-23 107 Hordeum vulgare Contig14029_at Contig14029 - - 2e-6 At5g57360 ZTL (ZEITLUPE) C.G. S.X.
0.09 8e-16 85 Oryza sativa Os02g0150800 BX901712 - Cyclin-like F-box domain containing protein 8e-1 At1g32470 glycine cleavage system H protein, mitochondrial, putative C.G. S.X.
0.42 6e-62 238 Populus trichocarpa PtpAffx.2892.2.S1_a_at CX173260 f-box family protein /// hypothetical protein - 1e-10 At5g57360 ZTL (ZEITLUPE) C.G. S.X.
0.21 3e-14 79 Triticum aestivum Ta.6462.2.S1_a_at CA650614 - - 3e+0 At5g18661 unknown protein C.G. S.X.
0.02 6e-1 34 Zea mays Zm.4717.1.A1_at AY107842.1 hypothetical protein LOC100191467 - 7e+0 At3g05746 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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