CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622162_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.98 100.0 1622162_at CD718954 - - 1e+0 At3g02390 unknown protein S.X. H.G.
0.45 64.6 1620549_s_at CF206023.1 - - 4e+0 At4g14358 - S.X. H.G.
0.43 61.5 1606772_at CF606865 hypothetical protein LOC100259703 /// hypothetical LOC100258253 - 1e-35 At4g16390 - S.X. H.G.
0.42 60.1 1606935_at CB969531 hypothetical protein LOC100262240 - 6e-51 At1g79440 ALDH5F1 S.X. H.G.
0.41 58.7 1614524_at CB981815 hypothetical protein LOC100261162 - 7e-9 At5g51545 LPA2 (low psii accumulation2) S.X. H.G.
0.40 57.7 1610684_at CF210128 hypothetical protein LOC100249184 - 2e-128 At4g24280 cpHsc70-1 (chloroplast heat shock protein 70-1) S.X. H.G.
0.40 57.7 1608548_s_at CF207041.1 hypothetical protein LOC100243384 - 3e+0 At5g43211 unknown protein S.X. H.G.
0.39 54.9 1622413_at CD714494 - - 3e-1 At4g39070 zinc finger (B-box type) family protein S.X. H.G.
0.39 54.9 1613388_at CF568873 - - 1e-9 At4g25370 Clp amino terminal domain-containing protein S.X. H.G.
0.36 50.7 1606449_at CF210281 hypothetical protein LOC100268079 - 6e-2 At4g29170 ATMND1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.2 99.8 GSM147673 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 2
12.0 99.8 GSM147692 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation 21
9.1 99.5 GSM147675 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 4
7.0 99.1 GSM147691 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation 20
6.6 98.9 GSM147681 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 10
4.8 97.8 GSM147686 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 15
4.6 97.6 GSM147674 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 3
4.6 97.6 GSM147693 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 22
4.4 97.3 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
4.3 97.2 GSM147679 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 8
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.81 0 678 1618383_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.38 3e-88 323 1608437_s_at CD712894 hypothetical protein LOC100261000 - 9e-6 At1g73885 unknown protein C.G. S.X.
0.38 3e-88 323 1606824_at CD712894 - - 9e-6 At1g73885 unknown protein C.G. S.X.
0.03 4e-1 34 1621721_at CD718881 hypothetical protein LOC100248049 - 3e-17 At5g08320 unknown protein C.G. S.X.
0.02 2e+0 32 1622463_at CB977897 hypothetical protein LOC100252976 - 2e-22 At1g21065 unknown protein C.G. S.X.
0.02 2e+0 32 1622115_at CD004218 hypothetical protein LOC100257320 - 5e-1 At2g20120 COV1 (CONTINUOUS VASCULAR RING) C.G. S.X.
0.03 2e+0 32 1621332_at CB347271 - - 2e+1 At5g53030 unknown protein C.G. S.X.
0.02 2e+0 32 1621239_at CF517123 - - 2e+0 At4g13266 unknown protein C.G. S.X.
0.02 2e+0 32 1618822_at CF214072 hypothetical protein LOC100250191 - 4e-7 At4g23496 SP1L5 (SPIRAL1-LIKE5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At3g02390 820514 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 5e-1 36 Glycine max GmaAffx.5379.1.S1_at BM568024 - - 1e-1 At1g34770 MAGE-8 antigen-related C.G. S.X.
0.04 3e+0 32 Hordeum vulgare Contig3855_at Contig3855 - - 6e-2 At2g21100 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
0.03 3e+0 34 Oryza sativa Os05g0367300 9633.m02764 - - 8e-2 At5g67190 AP2 domain-containing transcription factor, putative C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.1980.3.A1_a_at CV246685 hypothetical protein - 3e-4 At4g27380 unknown protein C.G. S.X.
0.04 5e+0 32 Triticum aestivum TaAffx.98037.1.S1_at BQ482757 - - 6e-1 At4g16380 metal ion binding C.G. S.X.
0.03 9e+0 30 Zea mays Zm.6182.1.S1_at CF039823 60S ribosomal protein L29 - 1e-21 At3g06700 60S ribosomal protein L29 (RPL29A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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