CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622113_at

Gene name hypothetical protein LOC100245719

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1622113_at CF209612 hypothetical protein LOC100245719 - 4e-61 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein S.X. H.G.
0.60 81.9 1611327_a_at BQ797873 hypothetical protein LOC100264625 - 4e-27 At1g68650 unknown protein S.X. H.G.
0.59 80.6 1616484_a_at CF405218 hypothetical protein LOC100262592 - 6e-2 At1g75170 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein S.X. H.G.
0.30 39.4 1619577_at CF213082 hypothetical protein LOC100266782 - 1e+0 At4g28950 ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) S.X. H.G.
0.27 34.0 1616425_at CF208709 hypothetical protein LOC100260616 - 5e-7 At2g32730 26S proteasome regulatory subunit, putative S.X. H.G.
0.21 24.0 1616332_at CF210511 hypothetical protein LOC100259445 - 2e-1 At4g27660 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.5 97.5 GSM322362 genotype: Chardonnay - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.8 96.4 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.5 95.7 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.5 95.7 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.4 95.5 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.4 95.5 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
3.4 95.5 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
3.3 95.2 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
3.3 95.2 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
3.3 95.2 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-14 79 1616079_at CD801867 hypothetical LOC100255014 - 3e-21 At4g03340 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.02 5e-2 38 1608070_at CF214791 hypothetical protein LOC100245501 - 1e+0 At4g10880 unknown protein C.G. S.X.
0.01 2e-1 36 1610788_at CB340703 - - 2e-29 Atcg00210 - C.G. S.X.
0.02 2e-1 36 1608654_at CF206468.1 - - 2e-15 At3g60340 palmitoyl protein thioesterase family protein C.G. S.X.
0.01 3e+0 32 1622688_at CD719837 - - 3e+0 At1g47420 - C.G. S.X.
0.02 3e+0 32 1622057_at CF512959 - - 1e-9 At3g56950 SIP2 C.G. S.X.
0.01 3e+0 32 1617157_at CF212494 hypothetical protein LOC100243483 - 1e-7 At3g49350 RAB GTPase activator C.G. S.X.
0.01 3e+0 32 1616932_at BQ797202 hypothetical protein LOC100254373 - 1e-8 At1g71110 unknown protein C.G. S.X.
0.02 3e+0 32 1616368_s_at CF512959 - - 1e-9 At3g56950 SIP2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 4e-61 236 Arabidopsis thaliana At5g15050 831357 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO - - - C.G. S.X.
0.32 1e-55 218 Glycine max GmaAffx.68089.1.S1_at BE554824 - - 2e-25 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.06 4e-13 75 Hordeum vulgare Contig14045_at Contig14045 - - 2e-18 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.19 7e-18 93 Oryza sativa Os06g0602800 AK070134.1 - Conserved hypothetical protein 2e-7 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.24 7e-14 79 Populus trichocarpa Ptp.1609.1.A1_s_at CA825364 hypothetical protein - 2e-12 At5g39990 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.11 1e-8 61 Triticum aestivum Ta.12174.1.A1_at CD452810 - - 1e-14 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.06 5e-6 52 Zea mays Zm.19208.1.A1_at CO525556 - - 1e+0 At1g04930 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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