Gene omics information

Query gene ID	1622099_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	77.3	1622099_at	CA811184	-	-	4e+0	At4g00165	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.80	93.6	1610332_x_at	CF204509.1	-	-	8e-1	At3g08000	RNA-binding protein, putative	S.X.	H.G.	Please select
0.73	90.8	1620097_x_at	CF202968.1	-	-	8e-1	At3g08000	RNA-binding protein, putative	S.X.	H.G.	Please select
0.73	90.8	1607877_x_at	CF202836.1	-	-	3e+1	Atcg01250	-	S.X.	H.G.	Please select
0.53	75.2	1618679_s_at	CB343106	-	-	4e-83	Atcg00280	-	S.X.	H.G.	Please select
0.38	53.6	1621184_at	CD009048	-	-	3e+1	At3g02555	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.5	99.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
10.0	99.6	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
8.8	99.5	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
7.3	99.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
7.0	99.1	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
5.9	98.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
5.8	98.6	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
5.8	98.6	GSM147736	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	65
5.8	98.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
5.1	98.1	GSM147704	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	33

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.92	0	2561	1609656_s_at	CA810365	-	-	4e+0	At4g00165	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.27	0	670	1618474_at	CB002899	-	-	1e-1	At4g26170	unknown protein	C.G.	S.X.	Please select
0.27	0	670	1614684_at	CB002899	-	-	1e-1	At4g26170	unknown protein	C.G.	S.X.	Please select
0.28	3e-118	424	1611227_at	CB345853	-	-	9e-1	At1g10970	ZIP4 (ZINC TRANSPORTER 4 PRECURSOR)	C.G.	S.X.	Please select
0.35	3e-90	331	1614565_at	CB342140	-	-	2e-1	At1g73885	unknown protein	C.G.	S.X.	Please select
0.19	2e-88	325	1616890_x_at	CF202744.1	-	-	1e+1	At5g40700	unknown protein	C.G.	S.X.	Please select
0.19	2e-88	325	1611705_s_at	CF202744.1	-	-	1e+1	At5g40700	unknown protein	C.G.	S.X.	Please select
0.19	2e-88	325	1606965_at	CF202744.1	-	-	1e+1	At5g40700	unknown protein	C.G.	S.X.	Please select
0.16	1e-64	246	1621193_at	CB343391	-	-	9e+0	At2g02120	PDF2.1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	34	Arabidopsis thaliana	At4g00165	828076	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:N-terminal protein myristoylation, lipid transport;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	6e-86	319	Glycine max	GmaAffx.89425.1.A1_s_at	CK606255	-	-	4e-1	At5g05110	cysteine protease inhibitor, putative / cystatin, putative	C.G.	S.X.	Please select
0.45	0	912	Hordeum vulgare	HVSMEc0019O14f_at	HVSMEc0019O14f	-	-	5e+0	At5g07960	unknown protein	C.G.	S.X.	Please select
0.24	8e-117	422	Oryza sativa	Os.47318.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	0	781	Populus trichocarpa	PtpAffx.33433.1.S1_at	CA820801	-	-	2e-1	At4g26170	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.42	0	983	Triticum aestivum	TaAffx.5802.1.S1_s_at	CA625074	-	-	1e+1	At5g07960	unknown protein	C.G.	S.X.	Please select
0.09	3e-94	345	Zea mays	ZmAffx.1221.1.S1_at	11990232-113	-	-	1e+0	At1g07140	SIRANBP	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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