CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1622084_at

Gene name hypothetical protein LOC100256435

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1622084_at CF513595 hypothetical protein LOC100256435 - 1e+0 At5g51451 unknown protein S.X. H.G.
0.55 77.3 1616611_at CF404283 - - 2e-1 At2g33220 - S.X. H.G.
0.50 72.7 1611396_at BQ800511 hypothetical protein LOC100253893 - 3e-1 At1g05136 unknown protein S.X. H.G.
0.50 72.7 1611516_at CB008162 hypothetical protein LOC100262734 - 2e-5 At3g28690 protein kinase, putative S.X. H.G.
0.50 72.7 1608474_at CF403530 hypothetical protein LOC100261256 - 1e-3 At1g09840 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41) S.X. H.G.
0.44 64.1 1621668_at BQ792797 similar to Histone H2B - 2e-27 At3g46030 HTB11 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.3 98.2 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436384 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-6 52 1615797_at CF513517 hypothetical protein LOC100256435 - 9e-27 At5g41310 kinesin motor protein-related C.G. S.X.
0.02 5e-3 40 1613896_at CA818837 hypothetical protein LOC100258695 - 5e-5 At1g18880 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.02 2e-2 38 1615359_at CA817149 hypothetical protein LOC100263850 - 5e-5 At1g18880 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.03 3e-1 34 1612019_at BQ800502 - - 3e-1 At2g33470 GLTP1 (glycolipid transfer protein 1) C.G. S.X.
0.03 1e+0 32 1615006_at CF513557 - - 4e+0 At5g60553 - C.G. S.X.
0.03 1e+0 32 1610339_at CD006681 - - 6e+0 At5g63225 - C.G. S.X.
0.03 1e+0 32 1606535_at CD006681 - - 6e+0 At5g63225 - C.G. S.X.
0.02 5e+0 30 1622516_at CB835618 - - 4e-1 At1g11500 unknown protein C.G. S.X.
0.02 5e+0 30 1619563_at CF514348 hypothetical protein LOC100255371 - 6e-3 At5g41770 crooked neck protein, putative / cell cycle protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At5g51451 6241076 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system - - - C.G. S.X.
0.05 9e-2 38 Glycine max Gma.17282.1.A1_at AW310923 - - 6e-1 At3g01250 unknown protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEm0012G16r2_at HVSMEm0012G16r2 - - 1e+0 At4g13160 unknown protein C.G. S.X.
0.04 8e+0 32 Oryza sativa OsAffx.10658.1.S1_x_at - - - 0 C.G. S.X.
0.03 1e+0 34 Populus trichocarpa PtpAffx.22652.1.S1_at BU896347 - - 5e+0 At3g46880 unknown protein C.G. S.X.
0.04 2e+1 30 Triticum aestivum TaAffx.78229.1.S1_at CA735650 - - 9e+0 At3g05410 unknown protein C.G. S.X.
0.02 7e+0 30 Zea mays Zm.6773.1.S1_at CA403542 hypothetical protein LOC100275921 - 2e+0 At5g09920 NRPB4 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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