Gene omics information

Query gene ID 1622010_at
Gene name similar to RNA polymerase alpha subunit
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6183.21622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-S.X.H.G.
0.6787.91616888_atCF403623similar to lactoylglutathione lyase, putative / glyoxalase I, putative-3e-73At1g67280lactoylglutathione lyase, putative / glyoxalase I, putativeS.X.H.G.
0.6384.31610711_s_atCF606982--4e+0At4g28085unknown proteinS.X.H.G.
0.6081.91614503_atCB972598--0Atcg00740-S.X.H.G.
0.4666.51620755_atCD798406hypothetical protein LOC100248862-7e-20At1g27385unknown proteinS.X.H.G.
0.3954.91608952_atCF414365hypothetical protein LOC100254862-9e-33At3g06730thioredoxin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.297.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.297.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
4.196.9GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61
3.896.4GSM147736Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation65
3.796.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
3.796.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
3.796.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63
3.796.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38
3.696.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55
3.595.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.96025651614503_atCB972598--0Atcg00740-C.G.S.X.
0.28012951617074_s_atCF204027.1similar to Os04g0237300 /// similar to RNA polymerase alpha subunit /// similar to RNA polymerase alpha subunit-3e-128Atcg00750-C.G.S.X.
0.103e-1264521621593_s_atAF347624.1--2e+0At2g31083CLE5 (CLAVATA3/ESR-RELATED 5)C.G.S.X.
0.167e-1244441617905_atCB343723--1e-12Atcg00760-C.G.S.X.
0.051e-913371613588_atCA818655--6e-175Atcg00730-C.G.S.X.
0.107e-873211612583_atCB003299--9e-5Atcg00730-C.G.S.X.
0.041e-421741617857_atCB349645--2e-6Atcg00740-C.G.S.X.
0.022e-341471610728_atCA808724--1e-180Atcg00800-C.G.S.X.
0.017e-4461612853_atCD721067--1e+1Atcg00750-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.250882Arabidopsis thalianaAtcg00740--RNA polymerase alpha subunit---C.G.S.X.
0.230714Glycine maxGmaAffx.18223.1.A1_atBU551287--3e-174Atcg00740-C.G.S.X.
0.152e-128460Hordeum vulgareContig11738_atContig11738--5e-63Atcg00780-C.G.S.X.
0.194e-65252Oryza sativaOsAffx.32331.1.A1_at---0C.G.S.X.
0.176e-54214Populus trichocarpaPtpAffx.213371.1.S1_atpmrna26163--2e-15Atcg00740-C.G.S.X.
0.161e-32143Triticum aestivumTaAffx.129824.1.S1_s_atCK159033--9e-22Atcg00740-C.G.S.X.
0.148e-97355Zea maysZmAffx.1521.1.S1_at11990232-58--1e-70Atcg00790-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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