Gene omics information

Query gene ID 1621989_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4260.11621989_atCD006576--3e-21At4g19230CYP707A1S.X.H.G.
0.3853.61620258_atAY427195.1--2e-2At1g14370APK2A (PROTEIN KINASE 2A)S.X.H.G.
0.1718.21608945_atBQ793580hypothetical protein LOC100263523-5e-32At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)S.X.H.G.
0.034.21614908_atCF413969--4e-1At2g33860ETT (ETTIN)S.X.H.G.
0.023.21621829_atCF608402hypothetical protein LOC100242154-8e-8At5g09440EXL4 (EXORDIUM LIKE 4)S.X.H.G.
0.012.11613837_atCF605759hypothetical protein LOC100248706-4e-4At1g47670amino acid transporter family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.0100.0GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
23.3100.0GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61
16.699.9GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
16.599.9GSM147714Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation43
7.399.2GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
6.799.0GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28
6.698.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
6.198.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
5.498.3GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.498.3GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-2381621733_atCD712090--1e-19At5g49930emb1441 (embryo defective 1441)C.G.S.X.
0.025e-2381621232_atBQ793032hypothetical protein LOC100249843-1e-7At1g05510-C.G.S.X.
0.025e-2381617974_atCD712090hypothetical protein LOC100267050-1e-19At5g49930emb1441 (embryo defective 1441)C.G.S.X.
0.022e-1361618344_atBQ796097hypothetical protein LOC100266422-2e-5At1g51160synbindin, putativeC.G.S.X.
0.028e-1341618581_atCA818570--6e+0At2g25482-C.G.S.X.
0.018e-1341614205_atCF404132hypothetical protein LOC100256824-7e-9At2g02960zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.018e-1341606860_atCB978614--2e+0At1g15165U-box domain-containing proteinC.G.S.X.
0.023e+0321622675_atCD007285--2e+0At3g61360pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.013e+0321622649_atCF513425--6e+0At5g45820CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-21103Arabidopsis thalianaAt4g19230827663CYP707A1Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.---C.G.S.X.
0.303e-1377Glycine maxGma.4167.2.S1_a_atAW423990Abscisic acid 8'-hydroxylase-6e-14At4g19230CYP707A1C.G.S.X.
0.021e+034Hordeum vulgareContig11708_atContig11708--1e-1At4g19230CYP707A1C.G.S.X.
0.025e+034Oryza sativaOsAffx.11798.1.S1_at---0C.G.S.X.
0.304e-31137Populus trichocarpaPtpAffx.223327.1.S1_atpmrna41264hypothetical protein-1e-39At4g19230CYP707A1C.G.S.X.
0.032e-138Triticum aestivumTa.22981.3.S1_a_atBJ291883--1e-6At4g19230CYP707A1C.G.S.X.
0.021e+034Zea maysZm.4924.1.A1_atCA398764--5e+0At4g30330small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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