CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621982_s_at

Gene name hypothetical protein LOC100265955

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 72.7 1621982_s_at BQ794582 hypothetical protein LOC100265955 - 1e-14 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) S.X. H.G.
0.57 79.8 1617825_s_at CF205420.1 - - 3e-23 At1g15880 GOS11 (golgi snare 11) S.X. H.G.
0.55 77.3 1607695_at CF208550 - - 2e-9 At1g15880 GOS11 (golgi snare 11) S.X. H.G.
0.53 75.2 1621710_at CF201680.1 - - 3e-1 At1g59690 - S.X. H.G.
0.46 66.5 1612126_at CF201785.1 - - 4e-1 At3g15810 unknown protein S.X. H.G.
0.33 45.7 1613156_at CF209286 hypothetical protein LOC100247989 - 6e-5 At1g53400 unknown protein S.X. H.G.
0.30 39.4 1607563_at CF203757.1 - - 7e-49 At5g61510 NADP-dependent oxidoreductase, putative S.X. H.G.
0.26 32.0 1617872_s_at CF404326 hypothetical protein LOC100257528 - 1e-66 At3g04600 tRNA synthetase class I (W and Y) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.2 99.4 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
7.0 99.1 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
6.6 98.9 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
6.5 98.9 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
6.3 98.8 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
6.2 98.8 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
6.1 98.7 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
5.9 98.6 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
5.7 98.5 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
5.6 98.4 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 0 993 1612126_at CF201785.1 - - 4e-1 At3g15810 unknown protein C.G. S.X.
0.38 7e-162 569 1618323_at CF512300 - - 2e-2 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.37 6e-113 406 1621227_at CA809172 hypothetical LOC100267178 - 7e-7 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.36 1e-42 173 1611249_s_at CF517155 hypothetical protein LOC100255334 - 6e-29 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.14 9e-41 167 1619808_at CB972340 hypothetical LOC100257572 - 4e-8 At1g09510 cinnamyl-alcohol dehydrogenase family / CAD family C.G. S.X.
0.08 2e-14 79 1622507_at CB975105 - - 6e-20 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.07 9e-7 54 1622267_at CF516149 hypothetical protein LOC100250166 - 7e-2 At1g09500 cinnamyl-alcohol dehydrogenase family / CAD family C.G. S.X.
0.01 2e-1 36 1614290_at CB342951 hypothetical protein LOC100253525 - 1e-73 At3g48420 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.01 2e-1 36 1614024_at CF211583 hypothetical protein LOC100245981 - 4e-2 At2g37930 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-14 81 Arabidopsis thaliana At1g51410 841566 cinnamyl-alcohol dehydrogenase, putative (CAD) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase - - - C.G. S.X.
0.13 2e-5 52 Glycine max GmaAffx.81481.1.S1_at BF598509 - - 1e+0 At1g66800 cinnamyl-alcohol dehydrogenase family / CAD family C.G. S.X.
0.05 2e-9 63 Hordeum vulgare Contig3928_s_at Contig3928 - - 1e-14 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.10 2e-6 56 Oryza sativa Os01g0528800 AK068824.1 - Cinnamyl alcohol dehydrogenase 2e-1 At5g19440 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.18 7e-48 192 Populus trichocarpa PtpAffx.42065.1.S1_at CV237437 - - 1e-1 At3g43829 unknown protein C.G. S.X.
0.04 9e-10 65 Triticum aestivum Ta.9129.1.S1_at CA649446 - - 1e-8 At1g51410 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
0.04 3e-4 46 Zea mays Zm.6870.1.A1_at BM379176 dihydroflavonol-4-reductase - 2e-11 At4g16430 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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