Gene omics information

Query gene ID	1621958_at
Gene name	hypothetical protein LOC100263890
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1621958_at	CF203054.1	hypothetical protein LOC100263890	-	4e-6	At3g12685	-	S.X.	H.G.	Please select
0.50	72.7	1616407_at	CD715829	hypothetical protein LOC100250971	-	7e-9	At1g52510	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.44	64.1	1610420_at	CA816989	hypothetical protein LOC100263772	-	6e-30	At1g73060	unknown protein	S.X.	H.G.	Please select
0.18	19.4	1610774_at	CD012179	hypothetical protein LOC100268058	-	2e-25	At4g39710	immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative	S.X.	H.G.	Please select
0.12	12.1	1621285_at	CB347466	hypothetical protein LOC100251632	-	3e-24	At4g01310	ribosomal protein L5 family protein	S.X.	H.G.	Please select
0.09	9.4	1618918_at	CA817284	-	-	3e-10	At1g78915	binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.0	99.6	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
8.1	99.4	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
7.3	99.2	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
6.9	99.1	GSM147695	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	24
6.8	99.0	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
6.5	98.9	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
6.2	98.8	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
5.3	98.2	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
4.7	97.7	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
4.6	97.6	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	32	1621486_at	CB970356	-	-	2e+0	At5g50840	-	C.G.	S.X.	Please select
0.02	1e+0	32	1619811_at	CF214476	hypothetical protein LOC100249327	-	2e-9	At4g15790	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1616503_s_at	CB973211	temperature-induced lipocalin	-	2e-12	At5g58070	TIL (TEMPERATURE-INDUCED LIPOCALIN)	C.G.	S.X.	Please select
0.04	1e+0	32	1615364_at	CB344806	-	-	2e-8	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	C.G.	S.X.	Please select
0.02	1e+0	32	1611303_at	CA816128	-	-	2e+0	At3g05725	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	1621530_at	CF403816	hypothetical protein LOC100241458	-	3e-1	At2g46140	late embryogenesis abundant protein, putative / LEA protein, putative	C.G.	S.X.	Please select
0.03	5e+0	30	1620944_at	CF373593	hypothetical protein LOC100254978	-	1e+0	At5g49260	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1616949_at	CF519047	hypothetical protein LOC100250114	-	2e-34	At5g53170	FTSH11 (FtsH protease 11)	C.G.	S.X.	Please select
0.02	5e+0	30	1616332_at	CF210511	hypothetical protein LOC100259445	-	2e-1	At4g27660	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	4e-6	52	Arabidopsis thaliana	At3g12685	820449	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.92973.1.S1_s_at	CF808698	-	-	2e+0	At3g22950	ATARFC1 (ADP-ribosylation factor C1)	C.G.	S.X.	Please select
0.03	7e+0	30	Hordeum vulgare	EBes01_SQ003_E20_at	EBes01_SQ003_E20	-	-	8e-1	At3g58550	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.06	2e+0	34	Oryza sativa	OsAffx.9735.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-5	50	Populus trichocarpa	PtpAffx.209215.1.S1_at	pmrna18221	hypothetical protein	-	3e-16	At3g12685	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	4e+0	32	Triticum aestivum	TaAffx.38100.1.A1_at	BJ250181	-	-	4e+0	At3g01185	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Zea mays	Zm.17336.1.A1_at	CF632816	-	-	3e-5	At3g57785	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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