Gene omics information

Query gene ID 1621904_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.61621904_atCF568995--4e+0At5g08070TCP17 (TCP DOMAIN PROTEIN 17)S.X.H.G.
0.6787.91610129_atCD718985--2e-2At5g10000ATFD4 (ferredoxin 4)S.X.H.G.
0.6787.91611600_atCD719533--8e-18At3g57000nucleolar essential protein-relatedS.X.H.G.
0.4464.11620697_atCF568836--1e+0At3g13857unknown proteinS.X.H.G.
0.4361.51607436_atCF568907--5e-24At3g60820PBF1S.X.H.G.
0.4361.51613219_atCF568857--4e-74At5g28850calcium-binding EF hand family proteinS.X.H.G.
0.4057.71621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)S.X.H.G.
0.2124.01607704_atAF488697.1serine/threonine kinase-like-2e-18At1g12310calmodulin, putativeS.X.H.G.
0.1616.71608672_s_atCK138170.1--6e-33At2g2158040S ribosomal protein S25 (RPS25B)S.X.H.G.
0.1414.41611242_atCF369027hypothetical protein LOC100248144-4e+0At4g18500unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.799.0GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
6.698.9GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.498.3GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
5.398.2GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
5.298.2GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.297.1GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.096.7GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.696.0GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-2361608979_atCA813957hypothetical protein LOC100262895-9e-6At5g48385-C.G.S.X.
0.013e-1341621035_atCB006610hypothetical protein LOC100249467-4e-18At1g04210leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.013e-1341608434_atCB006610--4e-18At1g04210leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.031e+0321622031_atCD713034--4e-1At1g73890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.021e+0321610136_a_atBQ792941similar to Elongation factor Tu, chloroplastic-8e-56At4g20360ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B)C.G.S.X.
0.031e+0321609404_atCD713034--4e-1At1g73890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.031e+0321609090_atCA816766--4e-1At1g23570unknown proteinC.G.S.X.
0.035e+0301622610_atCF413855hypothetical protein LOC100264665-5e-6At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.035e+0301622340_atCD720922--5e+0At5g16490RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g08070830701TCP17 (TCP DOMAIN PROTEIN 17)TCP gene involved in heterochronic control of leaf differentiation.---C.G.S.X.
0.152e-1273Glycine maxGma.13464.1.A1_a_atBE824093--3e+0At5g46710zinc-binding family proteinC.G.S.X.
0.062e-342Hordeum vulgareContig18885_atContig18885--3e-2At2g19860HXK2 (HEXOKINASE 2)C.G.S.X.
0.055e-136Oryza sativaOs07g0197100AF372832.1-Hexokinase6e-2At2g19860HXK2 (HEXOKINASE 2)C.G.S.X.
0.333e-1789Populus trichocarpaPtp.3844.1.S1_atCV245884hypothetical protein-3e-9At1g47840HXK3 (HEXOKINASE 3)C.G.S.X.
0.034e+032Triticum aestivumTaAffx.109275.1.S1_atCA677633--4e+0At3g18760ribosomal protein S6 family proteinC.G.S.X.
0.044e-134Zea maysZmAffx.448.1.A1_atAI677105Hexokinase-3e+0At4g29130HXK1 (HEXOKINASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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