Gene omics information

Query gene ID 1621840_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81621840_atCB036000--4e-7At1g64890integral membrane transporter family proteinS.X.H.G.
0.099.41618295_atCD710711--1e+0At5g40370glutaredoxin, putativeS.X.H.G.
0.045.21619575_atBQ793880--1e-3At1g48160signal recognition particle 19 kDa protein, putative / SRP19, putativeS.X.H.G.
0.023.21616402_a_atCF609414hypothetical protein LOC100241076-2e-15At4g36690ATU2AF65AS.X.H.G.
0.012.11617742_atCA817105hypothetical protein LOC100255734-4e-2At5g39910glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinS.X.H.G.
0.012.11620579_atCB976610--5e-22At5g55500XYLT (ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.999.5GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
6.698.9GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
6.498.9GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
6.098.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14
4.897.8GSM436407V. riparia (VR, PI588259) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.797.7GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.797.7GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19
4.697.6GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.697.6GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.90010011618056_atBM437711hypothetical protein LOC100240796-4e-7At1g64890integral membrane transporter family proteinC.G.S.X.
0.023e-2381614080_atCF517252hypothetical protein LOC100262480-1e-85At3g51260PAD1 (20s proteasome alpha subunit pad1)C.G.S.X.
0.024e-1341612857_a_atCD799060hypothetical protein LOC100257349-7e-56At3g51260PAD1 (20s proteasome alpha subunit pad1)C.G.S.X.
0.022e+0321622173_atCD719685--3e-6At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)C.G.S.X.
0.032e+0321621687_atBQ797109--1e+0At1g70030paired amphipathic helix repeat-containing proteinC.G.S.X.
0.032e+0321619716_atCF519146hypothetical protein LOC100263592-1e-21At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)C.G.S.X.
0.022e+0321618391_atCD719685--3e-6At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)C.G.S.X.
0.022e+0321617736_a_atCF209766hypothetical protein LOC100240929-6e-1At3g05500rubber elongation factor (REF) family proteinC.G.S.X.
0.022e+0321616847_s_atCA816751hypothetical protein LOC100267942-2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.134e-756Arabidopsis thalianaAt1g64890842797integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;BOPMAF---C.G.S.X.
0.032e+034Glycine maxGmaAffx.62799.1.S1_atBF069889--8e-2At1g20823zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.037e-134Hordeum vulgarerbasd17i02_s_atrbasd17i02--9e-35At2g21330fructose-bisphosphate aldolase, putativeC.G.S.X.
0.103e-654Oryza sativaOs05g0389400AK100484.1-Biopterin transport-related protein BT1 familyprotein2e-2At1g47240NRAMP2C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.218375.1.S1_atpmrna33969--3e-1At4g29470phospholipase A2, putativeC.G.S.X.
0.061e-448Triticum aestivumTaAffx.113007.1.S1_atCA618965--1e+0At3g49890unknown proteinC.G.S.X.
0.039e+030Zea maysZmAffx.1295.1.S1_s_at40794996-25--2e+0At4g04470PMP22C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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