Gene omics information

Query gene ID 1621834_at
Gene name hypothetical protein LOC100254175
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5375.21621834_atBQ794561hypothetical protein LOC100254175-2e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)S.X.H.G.
0.4464.11611787_atBQ793628similar to C2 domain-containing protein / GRAM domain-containing protein-3e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingS.X.H.G.
0.2225.61612132_s_atCB341731hypothetical protein LOC100254745-2e-2At1g22280protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.099.41614801_atCB978647hypothetical protein LOC100250155-1e-3At3g58570DEAD box RNA helicase, putativeS.X.H.G.
0.088.51618140_atCB981704similar to putative L19 ribosomal protein-3e-30At4g11630ribosomal protein L19 family proteinS.X.H.G.
0.077.81619420_atCF403238hypothetical protein LOC100260711-2e+0At3g26870self-incompatibility protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.198.7GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45
5.398.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39
5.198.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
4.897.8GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69
4.797.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
4.797.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63
4.497.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
3.796.2GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44
3.194.6GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.094.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-1341611611_atCB980376hypothetical protein LOC100259980-1e-1At1g72610GER1 (GERMIN-LIKE PROTEIN 1)C.G.S.X.
0.033e-1341607842_atCB980376--1e-1At1g72610GER1 (GERMIN-LIKE PROTEIN 1)C.G.S.X.
0.031e+0321622717_s_atCF606082--2e-1At5g65590Dof-type zinc finger domain-containing proteinC.G.S.X.
0.031e+0321618075_atCA811189hypothetical protein LOC100249271-1e+0At5g40500unknown proteinC.G.S.X.
0.021e+0321609678_atCB342813hypothetical protein LOC100265177-5e-20At4g26530fructose-bisphosphate aldolase, putativeC.G.S.X.
0.031e+0321608724_atCF568791--1e+0At3g50630KRP2 (KIP-RELATED PROTEIN 2)C.G.S.X.
0.025e+0301622696_atCA809588--1e+0At3g51920CAM9 (CALMODULIN 9)C.G.S.X.
0.035e+0301621408_atBQ798831hypothetical protein LOC100244724-5e+0Atmg01370-C.G.S.X.
0.035e+0301621077_s_atCB975305hypothetical protein LOC100256381-2e-17At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-550Arabidopsis thalianaAt3g02600821299LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)Encodes phosphatidic acid phosphatase. Expressed during germination.---C.G.S.X.
0.105e-1995Glycine maxGmaAffx.30344.1.S1_atAW349341--5e-6At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.066e-444Hordeum vulgareContig17857_atContig17857--4e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.046e-446Oryza sativaOs05g05499009633.m04439-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)9e-3At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.071e-1067Populus trichocarpaPtpAffx.208919.1.S1_atpmrna17686hypothetical protein-8e-3At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.063e-446Triticum aestivumTaAffx.80885.2.A1_atBJ287333--1e-3At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.053e-548Zea maysZm.16854.1.S1_atCF674957hypothetical protein LOC100273231-1e-1At3g18220phosphatidic acid phosphatase family protein / PAP2 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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