Gene omics information

Query gene ID	1621749_x_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1621749_x_at	CF569214.1	-	-	1e+0	At4g29960	unknown protein	S.X.	H.G.	Please select
0.91	98.8	1611884_at	CF569214.1	-	-	1e+0	At4g29960	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1615354_at	CF210983	-	-	2e-11	At2g20930	-	S.X.	H.G.	Please select
0.55	77.3	1612659_at	CF204873.1	-	-	5e-62	At4g28390	AAC3 (ADP/ATP CARRIER 3)	S.X.	H.G.	Please select
0.55	77.3	1611129_s_at	CB005644	hypothetical protein LOC100261235	-	2e+0	At2g06200	AtGRF6 (GROWTH-REGULATING FACTOR 6)	S.X.	H.G.	Please select
0.50	72.7	1616660_s_at	CF569214.1	similar to 60S ribosomal protein L19	-	1e+0	At4g29960	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.0	99.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
7.8	99.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
7.4	99.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
7.0	99.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
6.7	99.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
6.2	98.8	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
6.2	98.8	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
5.6	98.4	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
5.1	98.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
5.0	98.0	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.89	9e-95	343	1616660_s_at	CF569214.1	similar to 60S ribosomal protein L19	-	1e+0	At4g29960	unknown protein	C.G.	S.X.	Please select
0.89	9e-95	343	1615674_at	CF569214.1	-	-	1e+0	At4g29960	unknown protein	C.G.	S.X.	Please select
0.89	9e-95	343	1611884_at	CF569214.1	-	-	1e+0	At4g29960	unknown protein	C.G.	S.X.	Please select
0.16	3e-48	188	1621149_at	CF514701	similar to 60S ribosomal protein L19	-	3e-79	At1g02780	emb2386 (embryo defective 2386)	C.G.	S.X.	Please select
0.05	3e-2	36	1608808_at	CB348362	hypothetical protein LOC100252460	-	1e+0	Atmg01020	-	C.G.	S.X.	Please select
0.06	1e-1	34	1613721_at	CF372597	hypothetical protein LOC100264633	-	2e-19	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select
0.03	4e-1	32	1622814_at	CD004052	hypothetical protein LOC100260121	-	5e-1	At3g06420	ATG8H (autophagy 8h)	C.G.	S.X.	Please select
0.04	4e-1	32	1619674_at	CD715040	-	-	3e-1	At5g40500	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	32	1618993_at	CD004052	-	-	5e-1	At3g06420	ATG8H (autophagy 8h)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	32	Arabidopsis thaliana	At4g29960	829119	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	5e-1	34	Glycine max	GmaAffx.60042.1.S1_at	BM307355	-	-	4e-1	At4g29960	unknown protein	C.G.	S.X.	Please select
0.04	7e-1	32	Hordeum vulgare	Contig6938_at	Contig6938	-	-	1e+0	At1g45145	ATTRX5	C.G.	S.X.	Please select
0.08	1e+1	30	Oryza sativa	OsAffx.32268.1.A1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	36	Populus trichocarpa	PtpAffx.27102.2.S1_s_at	AJ780055	hypothetical protein	-	3e-14	At4g34200	EDA9 (embryo sac development arrest 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	6e+0	30	Triticum aestivum	TaAffx.3720.8.A1_at	CA735834	-	-	6e-39	Atcg00905	-	C.G.	S.X.	Please select
0.06	2e+0	30	Zea mays	ZmAffx.1307.1.S1_at	11990232-75	30S ribosomal protein S7	-	3e-114	Atcg00905	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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