CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621710_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1621710_at CF201680.1 - - 3e-1 At1g59690 - S.X. H.G.
0.61 83.2 1621079_at CF202060.1 - - 3e-51 At3g14290 PAE2 S.X. H.G.
0.60 81.9 1617825_s_at CF205420.1 - - 3e-23 At1g15880 GOS11 (golgi snare 11) S.X. H.G.
0.44 64.1 1607369_at CF213621 - - 1e-3 At1g26940 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein S.X. H.G.
0.25 30.5 1610463_at CF204701.1 hypothetical protein LOC100246159 - 1e-53 At4g17390 60S ribosomal protein L15 (RPL15B) S.X. H.G.
0.13 13.3 1613156_at CF209286 hypothetical protein LOC100247989 - 6e-5 At1g53400 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.4 98.3 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
5.3 98.2 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
5.0 98.0 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
4.8 97.8 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
4.1 96.9 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.0 96.7 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.8 96.4 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
3.7 96.2 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.5 95.7 GSM147734 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 63
3.2 94.9 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.76 0 928 1619507_s_at BQ794801 hypothetical protein LOC100261643 - 1e+0 At2g35120 glycine cleavage system H protein, mitochondrial, putative C.G. S.X.
0.01 3e-2 38 1608677_at CB977949 hypothetical protein LOC100258930 - 3e-22 At3g19130 ATRBP47B (RNA-binding protein 47B) C.G. S.X.
0.02 1e-1 36 1610757_at CD721094 - - 3e-3 Atmg01130 - C.G. S.X.
0.03 1e-1 36 1610212_at CF203864.1 - - 1e+0 At5g13090 unknown protein C.G. S.X.
0.02 1e-1 36 1606908_at CD721094 - - 3e-3 Atmg01130 - C.G. S.X.
0.03 2e+0 32 1622749_at CD715377 hypothetical protein LOC100253671 - 8e-1 At5g09978 PEP7 (ELICITOR PEPTIDE 7 PRECURSOR) C.G. S.X.
0.01 2e+0 32 1621286_at CF213632 hypothetical protein LOC100267319 - 3e-6 At4g24760 unknown protein C.G. S.X.
0.02 2e+0 32 1616418_at BQ797136 hypothetical protein LOC100258524 - 2e-4 At4g12910 scpl20 (serine carboxypeptidase-like 20) C.G. S.X.
0.03 2e+0 32 1615861_at BQ792340 hypothetical protein LOC100260969 - 3e+0 At4g03380 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At1g59690 842260 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.12 2e-12 73 Glycine max GmaAffx.24734.1.S1_at CA800237 - - 3e+0 At3g48350 cysteine proteinase, putative C.G. S.X.
0.04 3e+0 32 Hordeum vulgare HX03K20u_at HX03K20u - - 2e+0 At1g47720 OSB1 (Organellar Single-stranded) C.G. S.X.
0.03 3e+0 34 Oryza sativa Os03g0424200 AK069682.1 - Protein kinase domain containing protein 5e-1 At5g62627 - C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.69507.1.A1_at CV254785 hypothetical protein - 1e-6 At1g35190 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.03 4e-1 36 Triticum aestivum Ta.18530.2.S1_at CA631504 - - 3e+0 At1g46912 F-box family protein-related C.G. S.X.
0.03 9e+0 30 Zea mays ZmAffx.853.1.A1_at AI770653 - - 2e-1 At3g06130 heavy-metal-associated domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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