CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621583_at

Gene name hypothetical protein LOC100266937

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1621583_at CF404733 hypothetical protein LOC100266937 - 3e-12 At1g05850 POM1 (POM-POM1) S.X. H.G.
0.57 79.8 1607507_at CF415695 hypothetical protein LOC100265985 - 5e-3 At3g61050 NTMC2T4 S.X. H.G.
0.26 32.0 1612995_at CD012259 - - 4e-18 At3g13340 WD-40 repeat family protein S.X. H.G.
0.26 32.0 1619289_at CB340785 hypothetical protein LOC100242328 - 1e+0 At4g16265 NRPB9B S.X. H.G.
0.25 30.5 1613930_at CF213897 hypothetical protein LOC100259771 - 4e-85 At5g21070 unknown protein S.X. H.G.
0.16 16.7 1616981_at CB971105 phospholipase D alpha - 4e-52 At3g15730 PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1) S.X. H.G.
0.15 15.6 1616840_at CF608637 hypothetical protein LOC100255499 - 9e-15 At1g09140 SF2/ASF-like splicing modulator (SRP30) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.4 91.3 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436356 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436411 V. riparia (VR, PI588259) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 9e-81 299 1611120_at CF404821 - - 3e+0 At5g42797 LCR28 (Low-molecular-weight cysteine-rich 28) C.G. S.X.
0.30 5e-64 244 1614551_at CB343715 hypothetical protein LOC100261982 - 2e-18 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.26 4e-49 194 1620111_at CF568854 - - 1e-9 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.02 1e-2 40 1616559_at CA814615 hypothetical protein LOC100254834 - 6e-3 At1g04530 binding C.G. S.X.
0.02 5e-2 38 1616930_at CA809522 hypothetical protein LOC100248423 - 3e-14 At5g58260 - C.G. S.X.
0.01 2e-1 36 1622597_at CF212895 hypothetical protein LOC100244242 - 1e-4 At3g43520 unknown protein C.G. S.X.
0.02 2e-1 36 1621483_at BQ796003 hypothetical protein LOC100254964 - 2e-6 At1g12810 proline-rich family protein C.G. S.X.
0.02 2e-1 36 1617526_s_at CB972978 hypothetical protein LOC100250396 - 8e-1 At2g10920 unknown protein C.G. S.X.
0.02 2e-1 36 1616354_at CB913437 hypothetical protein LOC100251981 - 6e-6 At2g24590 splicing factor, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-12 73 Arabidopsis thaliana At1g05850 837095 POM1 (POM-POM1) Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. - - - C.G. S.X.
0.43 6e-64 246 Glycine max Gma.10757.2.S1_s_at BG650239 - - 2e-4 At3g16920 chitinase C.G. S.X.
0.09 1e-10 67 Hordeum vulgare Contig7454_at Contig7454 - - 1e-8 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.10 5e-25 117 Oryza sativa Os09g0494200 AK069564.1 - Glycoside hydrolase, family 19 protein 4e-6 At3g16920 chitinase C.G. S.X.
0.36 3e-84 313 Populus trichocarpa Ptp.2102.1.S1_s_at CV270946 hypothetical protein - 3e-6 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.05 3e-9 63 Triticum aestivum Ta.4385.1.S1_at BQ237751 - - 1e-2 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.11 2e-18 93 Zea mays Zm.3726.1.A1_at AY105990.1 hypothetical protein LOC100274504 - 2e-1 At1g05850 POM1 (POM-POM1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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