CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621556_s_at

Gene name hypothetical protein LOC100246330 /// hypothetical protein LOC100266521

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1621556_s_at CB980317 hypothetical protein LOC100246330 /// hypothetical protein LOC100266521 - 2e-4 At2g22430 ATHB6 S.X. H.G.
0.71 89.5 1619464_at CA818609 hypothetical protein LOC100254564 - 3e-11 At1g79160 unknown protein S.X. H.G.
0.67 87.9 1609974_at CB977877 hypothetical protein LOC100267017 - 2e-61 At4g26610 D6PKL1 (D6 PROTEIN KINASE LIKE 1) S.X. H.G.
0.32 43.1 1612516_at CB976044 hypothetical protein LOC100252647 - 8e-9 At4g39400 BRI1 (BRASSINOSTEROID INSENSITIVE 1) S.X. H.G.
0.19 20.9 1618184_at BQ795140 hypothetical protein LOC100255523 - 5e-84 At1g78870 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) S.X. H.G.
0.19 20.9 1619894_at CF204831.1 hypothetical protein LOC100244643 - 2e-43 At2g42590 GRF9 (GENERAL REGULATORY FACTOR 9) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 98.0 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.3 97.2 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436409 V. riparia (VR, PI588259) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436392 V. riparia (VR, PI588259) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.54 0 922 1618039_at CF202123.1 hypothetical protein LOC100246330 /// hypothetical protein LOC100266521 - 3e-1 At5g67610 unknown protein C.G. S.X.
0.04 1e-11 69 1610657_at CB978484 hypothetical protein LOC100241332 - 2e-22 At1g69780 ATHB13 C.G. S.X.
0.03 1e-5 50 1618437_at CB975851 hypothetical protein LOC100241577 - 7e-6 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) C.G. S.X.
0.04 1e-5 50 1613887_at CF511099 - - 7e-8 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) C.G. S.X.
0.09 5e-5 48 1619453_s_at CB346324 hypothetical protein LOC100260419 - 1e-1 At3g01470 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) C.G. S.X.
0.09 5e-5 48 1615011_at CB346324 hypothetical protein LOC100260419 - 1e-1 At3g01470 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) C.G. S.X.
0.02 5e-2 38 1620661_at CB970699 hypothetical protein LOC100251688 - 1e-1 At5g39760 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) C.G. S.X.
0.02 5e-2 38 1616817_at CF206346.1 hypothetical protein LOC100267328 - 9e-11 At5g37370 ATSRL1 C.G. S.X.
0.03 2e-1 36 1613567_at CB971370 - - 3e-2 At4g01895 systemic acquired resistance (SAR) regulator protein NIMIN-1-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 2e-4 48 Arabidopsis thaliana At2g22430 816775 ATHB6 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis. - - - C.G. S.X.
0.19 9e-29 129 Glycine max Gma.6451.1.S1_at AF184277.2 homeodomain-leucine zipper protein 56 - 3e-6 At2g22430 ATHB6 C.G. S.X.
0.04 3e-7 56 Hordeum vulgare Contig10759_at Contig10759 - - 7e-1 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) C.G. S.X.
0.04 9e-5 50 Oryza sativa Os02g0729700 AF264731.1 - Leucine zipper, homeobox-associated domaincontaining protein 4e-2 At5g66700 HB53 C.G. S.X.
0.25 3e-59 230 Populus trichocarpa PtpAffx.4806.3.S1_a_at BU893906 hypothetical protein - 4e-10 At2g22430 ATHB6 C.G. S.X.
0.03 8e-7 56 Triticum aestivum Ta.5284.1.S1_x_at CK200966 - - 1e-6 At5g65310 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) C.G. S.X.
0.03 1e-3 44 Zea mays Zm.2734.1.A1_at CK985510 homeodomain leucine zipper protein CPHB-5 - 2e-1 At3g01470 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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