Gene omics information

Query gene ID	1621538_at
Gene name	hypothetical protein LOC100261262
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.3	1621538_at	CA809611	hypothetical protein LOC100261262	-	4e-1	At2g43810	small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative	S.X.	H.G.	Please select
0.54	75.7	1622280_at	CA811085	-	-	1e+1	At5g04047	-	S.X.	H.G.	Please select
0.36	50.7	1621613_at	CF207534	-	-	2e-2	At2g38740	haloacid dehalogenase-like hydrolase family protein	S.X.	H.G.	Please select
0.26	32.0	1617040_at	CB980082	hypothetical protein LOC100249510	-	2e-1	At3g13440	methyltransferase/ nucleic acid binding	S.X.	H.G.	Please select
0.25	30.5	1620774_at	CB339523	-	-	1e+0	At4g29280	LCR22 (Low-molecular-weight cysteine-rich 22)	S.X.	H.G.	Please select
0.24	28.7	1621424_at	CB979690	-	-	4e+0	At4g24660	ATHB22 (HOMEOBOX PROTEIN 22)	S.X.	H.G.	Please select
0.21	24.0	1616675_at	CF213934	hypothetical protein LOC100267426	-	2e+1	At5g37290	armadillo/beta-catenin repeat family protein	S.X.	H.G.	Please select
0.21	24.0	1616760_at	CF404188	hypothetical protein LOC100246863	-	3e-9	At1g02880	TPK1 (THIAMIN PYROPHOSPHOKINASE1)	S.X.	H.G.	Please select
0.20	22.4	1615897_at	CF515994	hypothetical protein LOC100246578	-	5e+0	At3g25120	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.19	20.9	1607795_at	CF415624	hypothetical protein LOC100241031	-	3e-27	At1g63690	protease-associated (PA) domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.8	99.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
6.2	98.8	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
5.6	98.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
5.3	98.2	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
4.9	97.9	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
3.8	96.4	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.7	96.2	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	2e-114	410	1614986_at	CF372413	hypothetical protein LOC100261262	-	5e-15	At5g45410	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	1617461_at	CF609620	hypothetical protein LOC100245670	-	1e-1	At5g25360	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	34	1615804_at	CF403733	-	-	4e-2	At5g65910	BSD domain-containing protein	C.G.	S.X.	Please select
0.03	5e-1	34	1609708_at	CF213623	hypothetical protein LOC100266352	-	4e+0	At4g02450	glycine-rich protein	C.G.	S.X.	Please select
0.02	2e+0	32	1622481_x_at	CF568921	-	-	3e-2	At5g10430	AGP4 (ARABINOGALACTAN PROTEIN 4)	C.G.	S.X.	Please select
0.02	2e+0	32	1621952_at	BQ797666	hypothetical protein LOC100259489	-	3e-54	At5g20570	RBX1 (RING-BOX 1)	C.G.	S.X.	Please select
0.01	2e+0	32	1620964_s_at	S63225.1	stilbene synthase /// stilbene synthase /// hypothetical protein LOC100252908 /// hypothetical LOC100253166 /// resveratrol synthase	-	6e-1	At5g13930	TT4 (TRANSPARENT TESTA 4)	C.G.	S.X.	Please select
0.03	2e+0	32	1620692_at	CF202341.1	-	-	3e-1	At5g65330	AGL78 (AGAMOUS-LIKE 78)	C.G.	S.X.	Please select
0.02	2e+0	32	1618517_at	CB971627	hypothetical protein LOC100259328	-	2e+0	At3g12490	cysteine protease inhibitor, putative / cystatin, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-1	36	Arabidopsis thaliana	At2g43810	818985	small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative	F:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MAFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.6613.1.A1_at	AW350818	-	-	6e-1	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	C.G.	S.X.	Please select
0.03	3e+0	32	Hordeum vulgare	Contig19934_at	Contig19934	-	-	1e+0	At1g65484	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	34	Oryza sativa	Os10g0339000	9638.m01625	-	-	9e-1	At5g65910	BSD domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e-1	36	Populus trichocarpa	PtpAffx.18183.1.A1_at	CV257931	-	-	1e-1	At1g28570	GDSL-motif lipase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	7e+0	32	Triticum aestivum	Ta.4641.1.S1_at	BJ269244	-	-	3e+0	At2g35100	ARAD1 (ARABINAN DEFICIENT 1)	C.G.	S.X.	Please select
0.03	2e-1	36	Zea mays	Zm.15507.1.A1_at	CA405254	-	-	1e+0	At4g38170	FRS9 (FAR1-related sequence 9)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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