CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621530_at

Gene name hypothetical protein LOC100241458

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.6 1621530_at CF403816 hypothetical protein LOC100241458 - 3e-1 At2g46140 late embryogenesis abundant protein, putative / LEA protein, putative S.X. H.G.
0.47 67.7 1622007_at CD718228 - - 3e-1 At1g09195 - S.X. H.G.
0.36 50.7 1622196_at CF511416 hypothetical protein LOC100247323 - 6e-15 At3g25900 HMT-1 S.X. H.G.
0.23 27.5 1606943_at CF510910 hypothetical protein LOC100245618 - 2e+0 At2g46100 unknown protein S.X. H.G.
0.22 25.6 1620846_at CF209973 - - 4e-5 At4g14420 lesion inducing protein-related S.X. H.G.
0.19 20.9 1618308_at CB975280 hypothetical protein LOC100247408 - 4e-16 At5g63770 ATDGK2 (Diacylglycerol kinase 2) S.X. H.G.
0.17 18.2 1616211_at CF415232 hypothetical protein LOC100250444 - 8e-1 At3g27630 unknown protein S.X. H.G.
0.12 12.1 1609566_at CA814318 hypothetical protein LOC100257796 - 1e+0 At3g04700 unknown protein S.X. H.G.
0.06 6.8 1617242_at CF211993 hypothetical protein LOC100255381 - 2e-4 At1g09575 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.2 99.8 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
13.0 99.8 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
11.2 99.7 GSM436364 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
8.8 99.5 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
8.6 99.5 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
8.3 99.4 GSM147672 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 1
7.4 99.2 GSM287867 Green hard berry C1 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
6.6 98.9 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.3 98.8 GSM147684 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 13
5.6 98.4 GSM147690 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation 19
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 32 1619687_at CD798741 hypothetical protein LOC100242388 - 2e+0 At5g53880 unknown protein C.G. S.X.
0.03 6e+0 30 1621958_at CF203054.1 hypothetical protein LOC100263890 - 4e-6 At3g12685 - C.G. S.X.
0.02 6e+0 30 1620175_at CD719208 hypothetical protein LOC100256868 - 2e-2 At2g04880 ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1) C.G. S.X.
0.02 6e+0 30 1619554_at CF513781 hypothetical protein LOC100267218 - 2e-21 At5g63090 LOB (LATERAL ORGAN BOUNDARIES) C.G. S.X.
0.03 6e+0 30 1618966_at CF605835 - - 1e-1 At5g67490 unknown protein C.G. S.X.
0.02 6e+0 30 1618983_at CD011003 - - 5e+0 At5g66170 - C.G. S.X.
0.02 6e+0 30 1618718_at BQ792420 hypothetical protein LOC100264252 - 3e-4 At2g35490 plastid-lipid associated protein PAP, putative C.G. S.X.
0.02 6e+0 30 1618426_at CF511929 - - 1e-6 At5g63150 unknown protein C.G. S.X.
0.03 6e+0 30 1617306_at CA808681 similar to VPS24.1 - 2e-79 At5g22950 VPS24.1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At2g46140 819221 late embryogenesis abundant protein, putative / LEA protein, putative F:molecular_function unknown;P:embryonic development ending in seed dormancy, response to desiccation;C:plasma membrane;PBO - - - C.G. S.X.
0.11 1e-7 57 Glycine max GmaAffx.93598.1.S1_at CF809323 hypothetical LOC547837 - 4e-3 At2g46140 late embryogenesis abundant protein, putative / LEA protein, putative C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig3842_s_at Contig3842 - - 1e-3 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.09 4e-2 40 Oryza sativa Os01g0225600 AK063645.1 - Late embryogenesis abundant protein Lea14-A 4e-1 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.03 4e-1 36 Populus trichocarpa PtpAffx.658.4.S1_at BU814411 - - 1e+0 At3g48185 unknown protein C.G. S.X.
0.04 5e-3 42 Triticum aestivum Ta.15614.1.A1_at CA485825 - - 1e+0 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.06 4e-5 48 Zea mays Zm.15904.1.S1_at BQ577481 - - 7e+0 At3g02480 ABA-responsive protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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