CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621483_at

Gene name hypothetical protein LOC100254964

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1621483_at BQ796003 hypothetical protein LOC100254964 - 2e-6 At1g12810 proline-rich family protein S.X. H.G.
0.60 81.9 1611652_s_at CF208983 hypothetical protein LOC100264196 - 2e-53 At4g14880 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) S.X. H.G.
0.50 72.7 1620947_at CB341977 hypothetical protein LOC100257258 - 8e-47 At5g53850 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.36 50.7 1606902_a_at CB982252 hypothetical protein LOC100248362 - 2e-7 At3g01280 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) S.X. H.G.
0.35 48.5 1620873_at CB339891 hypothetical protein LOC100247687 - 1e-15 At2g37660 binding / catalytic/ coenzyme binding S.X. H.G.
0.27 34.0 1615943_at CB971749 hypothetical protein LOC100266273 - 5e-14 At1g51980 mitochondrial processing peptidase alpha subunit, putative S.X. H.G.
0.23 27.5 1617183_at CB339566 hypothetical protein LOC100258994 - 3e-19 At2g31490 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.3 95.2 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
3.2 94.9 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
2.8 93.4 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
2.8 93.4 GSM147713 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 42
2.7 93.0 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.6 92.5 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
2.6 92.5 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
2.6 92.5 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
2.5 91.9 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
2.5 91.9 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 38 1617694_at CB972462 hypothetical protein LOC100260852 - 1e-28 At2g20570 GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1) C.G. S.X.
0.03 3e-2 38 1616559_at CA814615 hypothetical protein LOC100254834 - 6e-3 At1g04530 binding C.G. S.X.
0.03 3e-2 38 1614656_at CF517320 hypothetical protein LOC100243714 - 1e-19 At4g36870 BLH2 (BEL1-LIKE HOMEODOMAIN 2) C.G. S.X.
0.02 1e-1 36 1621583_at CF404733 hypothetical protein LOC100266937 - 3e-12 At1g05850 POM1 (POM-POM1) C.G. S.X.
0.02 1e-1 36 1620717_at BQ799683 hypothetical protein LOC100255378 - 3e-15 At5g58430 ATEXO70B1 (exocyst subunit EXO70 family protein B1) C.G. S.X.
0.04 1e-1 36 1617526_s_at CB972978 hypothetical protein LOC100250396 - 8e-1 At2g10920 unknown protein C.G. S.X.
0.03 1e-1 36 1616354_at CB913437 hypothetical protein LOC100251981 - 6e-6 At2g24590 splicing factor, putative C.G. S.X.
0.04 1e-1 36 1613847_s_at CB971599 hypothetical protein LOC100256616 - 2e-5 At3g57160 unknown protein C.G. S.X.
0.02 1e-1 36 1613567_at CB971370 - - 3e-2 At4g01895 systemic acquired resistance (SAR) regulator protein NIMIN-1-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-6 54 Arabidopsis thaliana At1g12810 837837 proline-rich family protein F:unknown;P:unknown;C:unknown;MPFOBVA - - - C.G. S.X.
0.05 1e-1 38 Glycine max Gma.6758.1.S1_s_at BU760603 - - 8e-5 At2g41420 proline-rich family protein C.G. S.X.
0.05 2e-7 56 Hordeum vulgare Contig17271_at Contig17271 - - 2e-2 At5g47550 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.04 1e-5 52 Oryza sativa Os03g0802200 AK111769.1 - Hypothetical protein 3e-4 At4g33660 unknown protein C.G. S.X.
0.20 5e-7 56 Populus trichocarpa PtpAffx.5850.3.A1_s_at CV281939 hypothetical protein - 1e+0 At1g56060 unknown protein C.G. S.X.
0.05 6e-6 52 Triticum aestivum Ta.5681.1.S1_x_at CA605111 - - 1e-4 At2g41420 proline-rich family protein C.G. S.X.
0.06 4e-8 57 Zea mays Zm.2771.1.A1_at CF014105 annexin A7 - 2e-2 At1g56060 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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