Gene omics information

Query gene ID	1621420_at
Gene name	FUL-like protein
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.38	53.6	1621420_at	AY275713.1	FUL-like protein	-	5e-38	At5g60910	AGL8 (agamous-like 8)	S.X.	H.G.	Please select
0.67	87.9	1614189_at	CD800927	flowering locus T-like protein	-	2e-14	At1g65480	FT (FLOWERING LOCUS T)	S.X.	H.G.	Please select
0.67	87.9	1621072_at	BQ798954	hypothetical protein LOC100245407 /// hypothetical protein LOC100262565	-	7e-7	At1g28220	ATPUP3	S.X.	H.G.	Please select
0.61	83.2	1616880_at	CF209215	hypothetical protein LOC100258571	-	3e-1	At4g37980	ELI3-1 (ELICITOR-ACTIVATED GENE 3-1)	S.X.	H.G.	Please select
0.61	83.2	1613831_at	CD801016	hypothetical protein LOC100247537	-	1e-10	At4g37970	CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)	S.X.	H.G.	Please select
0.61	83.2	1612792_at	CB977497	-	-	4e-1	At2g17040	anac036 (Arabidopsis NAC domain containing protein 36)	S.X.	H.G.	Please select
0.31	41.3	1622623_at	CF514619	hypothetical protein LOC100258799	-	1e+0	At1g64680	unknown protein	S.X.	H.G.	Please select
0.17	18.2	1608099_at	CD800698	brassinosteroid-6-oxidase	-	5e-6	At3g30180	BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.2	99.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
15.9	99.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
15.2	99.9	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
14.5	99.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.8	99.8	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.3	99.2	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.2	99.1	GSM436366	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
7.1	99.1	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.9	99.1	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.9	99.1	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-10	65	1614965_at	BQ792730	MADS-box protein 4	-	6e-36	At1g24260	SEP3 (SEPALLATA3)	C.G.	S.X.	Please select
0.11	7e-10	63	1609046_at	CB971729	hypothetical protein LOC100256085	-	1e-13	At2g45650	AGL6 (AGAMOUS-LIKE 6)	C.G.	S.X.	Please select
0.10	4e-8	57	1612606_at	AF373602.1	MADS-box protein 3	-	7e-31	At2g03710	SEP4 (SEPALLATA 4)	C.G.	S.X.	Please select
0.06	6e-7	54	1615127_at	CB008551	-	-	5e-1	At4g24540	AGL24 (AGAMOUS-LIKE 24)	C.G.	S.X.	Please select
0.06	6e-7	54	1611361_at	CB008551	hypothetical protein LOC100241171	-	5e-1	At4g24540	AGL24 (AGAMOUS-LIKE 24)	C.G.	S.X.	Please select
0.03	9e-3	40	1618646_at	CF514673	hypothetical protein LOC100247238	-	4e-4	At3g52230	unknown protein	C.G.	S.X.	Please select
0.03	4e-2	38	1619833_at	CF515145	-	-	1e+0	At5g50345	-	C.G.	S.X.	Please select
0.02	1e-1	36	1618858_at	CB972840	hypothetical LOC100253454	-	5e+0	At5g48543	LCR1 (Low-molecular-weight cysteine-rich 1)	C.G.	S.X.	Please select
0.02	1e-1	36	1611053_at	CF405013	-	-	1e-15	At5g28540	BIP1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	5e-38	159	Arabidopsis thaliana	At5g60910	836212	AGL8 (agamous-like 8)	MADS box gene negatively regulated by APETALA1	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	6e-23	109	Glycine max	GmaAffx.57956.1.S1_at	BQ454007	-	-	1e-33	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please select
0.13	4e-6	52	Hordeum vulgare	Contig11229_at	Contig11229	-	-	2e-4	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please select
0.14	3e-10	67	Oryza sativa	Os07g0108900	AF058698.1	-	MADS15 protein	8e-16	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	5e-48	192	Populus trichocarpa	PtpAffx.13798.1.S1_at	AY515153.1	hypothetical protein	-	3e-30	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	4e-8	59	Triticum aestivum	TaAffx.143995.17.A1_at	AY188331	-	-	1e-3	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please select
0.11	2e-14	79	Zea mays	Zm.14828.1.S1_at	AJ430632.1	m15 protein	-	8e-10	At5g60910	AGL8 (agamous-like 8)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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