Gene omics information

Query gene ID	1621391_at
Gene name	hypothetical protein LOC100251148
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.78	92.6	1621391_at	CD801716	hypothetical protein LOC100251148	-	4e+0	At5g47980	transferase family protein	S.X.	H.G.	Please select
0.57	79.8	1622722_at	CF209124	-	-	4e-1	At4g30067	LCR63 (Low-molecular-weight cysteine-rich 63)	S.X.	H.G.	Please select
0.35	48.5	1616177_at	BQ800589	similar to 3-methyladenine DNA glycosylase, putative; 31680-30045	-	2e+1	At5g42630	ATS (ABERRANT TESTA SHAPE)	S.X.	H.G.	Please select
0.31	41.3	1618613_at	BQ795651	hypothetical protein LOC100245552	-	6e-7	At2g35510	SRO1 (SIMILAR TO RCD ONE 1)	S.X.	H.G.	Please select
0.26	32.0	1616971_a_at	CF208808	hypothetical protein LOC100263708	-	4e-119	At1g60490	ATVPS34	S.X.	H.G.	Please select
0.25	30.5	1607683_at	CF207162	hypothetical protein LOC100266122	-	2e-5	At1g47710	serpin, putative / serine protease inhibitor, putative	S.X.	H.G.	Please select
0.20	22.4	1621933_at	BQ800280	hypothetical protein LOC100249852	-	5e+0	At3g17090	protein phosphatase 2C family protein / PP2C family protein	S.X.	H.G.	Please select
0.19	20.9	1610676_at	BQ794329	hypothetical protein LOC100267604	-	1e+0	At4g13360	catalytic	S.X.	H.G.	Please select
0.19	20.9	1619596_at	CB973318	hypothetical protein LOC100255105	-	6e-1	At1g65113	SCRL2 (SCR-Like 2)	S.X.	H.G.	Please select
0.15	15.6	1619567_at	BQ799671	hypothetical protein LOC100245596	-	4e+0	At5g09330	anac082 (Arabidopsis NAC domain containing protein 82)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.7	96.2	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	32	1615028_at	CF512306	hypothetical protein LOC100244467	-	5e-20	At3g60530	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1614305_at	CF209543	hypothetical protein LOC100250847	-	4e+0	At5g65880	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1622304_at	CF513613	hypothetical protein LOC100267709	-	2e+0	At2g19740	60S ribosomal protein L31 (RPL31A)	C.G.	S.X.	Please select
0.03	5e+0	30	1620247_at	CA809623	hypothetical protein LOC100243060	-	7e-11	At3g08010	ATAB2	C.G.	S.X.	Please select
0.02	5e+0	30	1618533_at	CB970020	hypothetical protein LOC100265073	-	8e-9	At4g25790	allergen V5/Tpx-1-related family protein	C.G.	S.X.	Please select
0.01	5e+0	30	1614018_at	CF517456	hypothetical protein LOC100254197	-	2e-57	At1g22770	GI (GIGANTEA)	C.G.	S.X.	Please select
0.02	5e+0	30	1613677_at	CB969707	hypothetical protein LOC100256792	-	3e-15	At2g04780	FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN 7)	C.G.	S.X.	Please select
0.02	5e+0	30	1607492_at	CF205018.1	ripening-related protein-like	-	4e-1	At3g63420	AGG1 (Arabidopsis Ggamma-subunit 1)	C.G.	S.X.	Please select
0.02	2e+1	28	1622426_at	CF205289.1	-	-	9e-5	At2g39210	nodulin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At5g47980	834849	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.30	3e-17	89	Glycine max	GmaAffx.377.2.S1_at	AW318126	-	-	2e-1	At5g53880	unknown protein	C.G.	S.X.	Please select
0.10	2e-9	61	Hordeum vulgare	Contig23611_at	Contig23611	-	-	3e-7	At5g27450	MK (MEVALONATE KINASE)	C.G.	S.X.	Please select
0.09	9e-9	61	Oryza sativa	Os10g0329300	NM_195741.1	-	Mevalonate kinase (EC 2.7.1.36) (MK)	9e-6	At5g27450	MK (MEVALONATE KINASE)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	1e-28	127	Populus trichocarpa	PtpAffx.29282.1.A1_a_at	BP934395	hypothetical protein	-	2e-13	At5g27450	MK (MEVALONATE KINASE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	1e-9	63	Triticum aestivum	Ta.14913.1.S1_at	CA623629	-	-	8e-7	At5g27450	MK (MEVALONATE KINASE)	C.G.	S.X.	Please select
0.06	5e-4	44	Zea mays	Zm.14076.2.A1_a_at	CO526265	hypothetical protein LOC100279817	-	9e-2	At5g27450	MK (MEVALONATE KINASE)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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