Gene omics information

Query gene ID 1621335_at
Gene name hypothetical LOC100245838
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7189.51621335_atCD004084hypothetical LOC100245838-5e-1At2g37975-S.X.H.G.
0.8093.61608633_s_atCA814450hypothetical protein LOC100253479-1e-26At5g62740band 7 family proteinS.X.H.G.
0.5577.31614233_atCA814450hypothetical protein LOC100253479-1e-26At5g62740band 7 family proteinS.X.H.G.
0.4057.71621554_s_atCF511998similar to Os03g0670700-4e-6At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.2327.51613168_atCB971028hypothetical protein LOC100257704-4e-42At1g29880glycyl-tRNA synthetase / glycine--tRNA ligaseS.X.H.G.
0.1515.61616828_s_atCD799685similar to Os03g0670700-1e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.699.6GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
5.998.6GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
5.698.4GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69
5.098.0GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39
4.697.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.697.6GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45
4.597.5GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.196.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63
4.196.9GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.996.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00021071608728_atCD004084--5e-1At2g37975-C.G.S.X.
0.024e-2381619707_atCB349038--4e+0At4g27800protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1)C.G.S.X.
0.012e-1361607360_atCB342405hypothetical protein LOC100246988-2e-47At1g78510SPS1 (solanesyl diphosphate synthase 1)C.G.S.X.
0.016e-1341622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.026e-1341620958_atCD801330hypothetical protein LOC100251059-1e+0At5g48660-C.G.S.X.
0.026e-1341616935_atCB350131hypothetical protein LOC100250028-1e-30At2g32070CCR4-NOT transcription complex protein, putativeC.G.S.X.
0.026e-1341612528_atCB982094--2e-12At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)C.G.S.X.
0.026e-1341608761_atCB982029hypothetical protein LOC100253831-2e-12At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)C.G.S.X.
0.023e+0321622422_atCD800947hypothetical protein LOC100251499-2e-21At1g72990BGAL17 (beta-galactosidase 17)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt2g37975818375-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO---C.G.S.X.
0.033e+034Glycine maxGmaAffx.27228.1.S1_atBM095077--7e-29At1g80350ERH3 (ECTOPIC ROOT HAIR 3)C.G.S.X.
0.032e-240Hordeum vulgareEBro08_SQ009_E20_atEBro08_SQ009_E20--1e+0At3g01440oxygen evolving enhancer 3 (PsbQ) family proteinC.G.S.X.
0.021e+036Oryza sativaOsAffx.15921.1.S1_at---0C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.222904.1.S1_atpmrna40623hypothetical protein-9e-3At4g13380MEE56 (maternal effect embryo arrest 56)C.G.S.X.
0.039e+032Triticum aestivumTaAffx.55318.1.S1_atCA668335--1e+1At5g09570-C.G.S.X.
0.039e-134Zea maysZm.6085.3.S1_a_atAI668392--9e+0At5g53820unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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