Gene omics information

Query gene ID	1621184_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1621184_at	CD009048	-	-	3e+1	At3g02555	unknown protein	S.X.	H.G.	Please select
0.60	81.9	1610332_x_at	CF204509.1	-	-	8e-1	At3g08000	RNA-binding protein, putative	S.X.	H.G.	Please select
0.55	77.3	1607877_x_at	CF202836.1	-	-	3e+1	Atcg01250	-	S.X.	H.G.	Please select
0.53	75.2	1618679_s_at	CB343106	-	-	4e-83	Atcg00280	-	S.X.	H.G.	Please select
0.35	48.5	1621593_s_at	AF347624.1	-	-	2e+0	At2g31083	CLE5 (CLAVATA3/ESR-RELATED 5)	S.X.	H.G.	Please select
0.15	15.6	1622348_s_at	CB342797	hypothetical protein LOC100248623	-	1e-34	At1g78630	emb1473 (embryo defective 1473)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	99.1	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
6.4	98.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
6.3	98.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
6.2	98.8	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
6.0	98.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
6.0	98.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
5.7	98.5	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
5.3	98.2	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
5.2	98.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
5.0	98.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	5e-112	402	1617413_at	CD009048	-	-	3e+1	At3g02555	unknown protein	C.G.	S.X.	Please select
0.03	1e-4	46	1622419_at	CB343655	GAGA-binding transcriptional activator BBR/BPC1-like	-	5e-20	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	C.G.	S.X.	Please select
0.03	1e-4	46	1619209_at	CA817415	-	-	2e+0	At1g76680	OPR1	C.G.	S.X.	Please select
0.01	1e-4	46	1614676_s_at	BQ793152	ATP synthase subunit a, chloroplastic	-	0	Atcg00120	-	C.G.	S.X.	Please select
0.01	1e-4	46	1609916_s_at	CD005933	hypothetical protein LOC100266722	-	0	Atcg00120	-	C.G.	S.X.	Please select
0.01	1e-4	46	1608138_s_at	CB342671	-	-	0	Atcg00120	-	C.G.	S.X.	Please select
0.02	2e-3	42	1607398_at	CA816260	-	-	7e-97	Atcg00650	-	C.G.	S.X.	Please select
0.04	3e-2	38	1617715_at	CB345894	-	-	9e+0	At4g31790	diphthine synthase, putative (DPH5)	C.G.	S.X.	Please select
0.02	2e+0	32	1616436_at	CF516544	-	-	5e+0	At4g13060	F-box family protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+1	30	Arabidopsis thaliana	At3g02555	820627	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	GmaAffx.39466.1.S1_at	AW705681	-	-	3e+0	At5g23440	FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)	C.G.	S.X.	Please select
0.03	2e-1	36	Hordeum vulgare	Contig18391_s_at	Contig18391	-	-	1e+1	Atmg01410	-	C.G.	S.X.	Please select
0.07	6e-14	79	Oryza sativa	Os.47976.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	6e-1	36	Populus trichocarpa	Ptp.86.1.S1_at	CK088799	hypothetical protein	-	3e-11	At1g14840	ATMAP70-4 (microtubule-associated proteins 70-4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	7e-6	52	Triticum aestivum	TaAffx.1888.1.A1_at	CA660349	-	-	1e+1	Atmg01010	-	C.G.	S.X.	Please select
0.02	1e+1	30	Zea mays	Zm.6476.1.A1_at	BG266009	hypothetical protein LOC100275764	-	2e+1	At3g48231	LCR48 (Low-molecular-weight cysteine-rich 48)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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