CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621151_at

Gene name hypothetical protein LOC100260643

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1621151_at CB971601 hypothetical protein LOC100260643 - 3e-1 At3g07260 forkhead-associated domain-containing protein / FHA domain-containing protein S.X. H.G.
0.77 92.3 1615239_at CF511089 - - 4e-3 At5g45620 26S proteasome regulatory subunit, putative (RPN9) S.X. H.G.
0.67 87.9 1617632_at CF210911 hypothetical protein LOC100265855 - 4e+0 At4g09440 unknown protein S.X. H.G.
0.59 80.6 1614174_at CF204824.1 - - 1e+0 At1g23360 UbiE/COQ5 methyltransferase family protein S.X. H.G.
0.40 57.7 1611283_at CB341968 hypothetical protein LOC100254717 - 2e-2 At4g23060 IQD22 (IQ-domain 22) S.X. H.G.
0.23 27.5 1607261_at CF517377 hypothetical protein LOC100254622 - 9e-2 At2g01755 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.7 99.9 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
8.7 99.5 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.7 99.3 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.7 99.3 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.2 99.1 GSM436385 Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.1 99.1 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.8 99.0 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
6.7 99.0 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.2 98.8 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
5.9 98.6 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 8e-21 99 1620469_at CF209780 - - 4e-3 At1g21120 O-methyltransferase, putative C.G. S.X.
0.04 5e-10 63 1611711_at CF211612 hypothetical protein LOC100251741 - 2e+0 At5g14330 unknown protein C.G. S.X.
0.21 4e-7 54 1619517_at CF202125.1 O-methyltransferase - 4e-1 At4g09000 14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) C.G. S.X.
0.03 2e-3 42 1617632_at CF210911 hypothetical protein LOC100265855 - 4e+0 At4g09440 unknown protein C.G. S.X.
0.02 4e-1 34 1618313_at CB339184 hypothetical protein LOC100245567 - 4e-2 At5g50740 metal ion binding C.G. S.X.
0.02 4e-1 34 1612281_at CF208454 hypothetical protein LOC100260786 - 8e-13 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
0.02 4e-1 34 1612076_at CD010541 hypothetical protein LOC100267716 - 3e-52 At1g61580 RPL3B (R-PROTEIN L3 B) C.G. S.X.
0.02 2e+0 32 1622876_at CF209501 hypothetical protein LOC100264658 - 2e-9 At2g26660 SPX2 (SPX DOMAIN GENE 2) C.G. S.X.
0.02 2e+0 32 1622471_at CB976320 hypothetical protein LOC100254638 - 5e-1 At5g14470 GHMP kinase-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At3g07260 819914 forkhead-associated domain-containing protein / FHA domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMPOB - - - C.G. S.X.
0.06 8e-6 52 Glycine max GmaAffx.32612.1.S1_at BU762383 - - 3e+0 At5g47229 unknown protein C.G. S.X.
0.04 4e-2 38 Hordeum vulgare Contig5613_at Contig5613 - - 5e+0 At2g45650 AGL6 (AGAMOUS-LIKE 6) C.G. S.X.
0.07 2e-4 48 Oryza sativa Os07g0462800 9635.m02703 - - 2e+0 At5g01840 OFP1 (OVATE FAMILY PROTEIN 1) C.G. S.X.
0.23 2e-18 93 Populus trichocarpa PtpAffx.203864.1.S1_at pmrna7631 flavonoid o-methyltransferase related - 2e+0 At1g31720 unknown protein C.G. S.X.
0.04 4e-1 36 Triticum aestivum Ta.20806.1.A1_at CA617815 - - 5e+0 At5g45775 60S ribosomal protein L11 (RPL11D) C.G. S.X.
0.06 2e-3 42 Zea mays Zm.2681.1.A1_at BM073609 - - 5e+0 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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