Gene omics information

Query gene ID	1621139_at
Gene name	hypothetical protein LOC100262947
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1621139_at	CB982951	hypothetical protein LOC100262947	-	3e-9	At5g08390	-	S.X.	H.G.	Please select
0.67	87.9	1617238_at	CD800896	hypothetical protein LOC100258246	-	3e-27	At1g63430	leucine-rich repeat transmembrane protein kinase, putative	S.X.	H.G.	Please select
0.61	83.2	1615577_at	CB340193	hypothetical protein LOC100256811	-	4e-92	At5g05170	CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)	S.X.	H.G.	Please select
0.53	75.2	1611391_at	CF513307	hypothetical protein LOC100256320	-	1e-15	At1g48410	AGO1 (ARGONAUTE 1)	S.X.	H.G.	Please select
0.50	72.7	1622512_at	CF208965	hypothetical protein LOC100260682	-	4e-27	At4g38430	ROPGEF1	S.X.	H.G.	Please select
0.44	64.1	1618668_at	CF513937	hypothetical protein LOC100254706	-	1e+0	At2g19760	PRF1 (PROFILIN 1)	S.X.	H.G.	Please select
0.36	50.7	1613856_at	CD012158	hypothetical protein LOC100264793	-	4e-89	At1g31420	FEI1 (FEI 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	94.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.7	93.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436412	V. riparia (VR, PI588259) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.3	90.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.3	90.7	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	1621819_at	CD717926	-	-	7e-33	At1g49670	NQR	C.G.	S.X.	Please select
0.02	2e-1	36	1618046_at	CD717926	hypothetical protein LOC100258817	-	7e-33	At1g49670	NQR	C.G.	S.X.	Please select
0.02	2e-1	36	1617580_at	CF518891	hypothetical protein LOC100250120	-	9e-14	At5g24120	SIGE (SIGMA FACTOR E)	C.G.	S.X.	Please select
0.02	7e-1	34	1619953_at	CF568838	-	-	1e+0	At2g33400	unknown protein	C.G.	S.X.	Please select
0.01	7e-1	34	1609147_at	CB979150	hypothetical protein LOC100256452	-	3e-15	At1g04410	malate dehydrogenase, cytosolic, putative	C.G.	S.X.	Please select
0.02	7e-1	34	1607792_at	CF214419	hypothetical protein LOC100250805	-	1e+0	At1g10717	-	C.G.	S.X.	Please select
0.02	7e-1	34	1606466_at	CF512311	hypothetical protein LOC100250341	-	1e-80	At1g79830	GC5 (golgin candidate 5)	C.G.	S.X.	Please select
0.02	3e+0	32	1622202_at	CD721645	hypothetical LOC100243631	-	3e-1	At3g25270	nucleic acid binding	C.G.	S.X.	Please select
0.02	3e+0	32	1620075_at	CB004363	-	-	6e+0	At5g49410	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-9	63	Arabidopsis thaliana	At5g08390	830737	-	F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOPBAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e-4	48	Glycine max	Gma.800.1.S1_at	CD390779	-	-	2e+0	At5g60550	GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2)	C.G.	S.X.	Please select
0.02	3e-1	36	Hordeum vulgare	Contig24602_at	Contig24602	-	-	5e+0	At3g10195	-	C.G.	S.X.	Please select
0.02	5e+0	34	Oryza sativa	Os03g0828000	9631.m06038	-	-	1e-1	At2g36160	40S ribosomal protein S14 (RPS14A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.22	1e-30	135	Populus trichocarpa	PtpAffx.209455.1.S1_at	pmrna18732	hypothetical protein	-	2e-128	At5g23430	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e-1	36	Triticum aestivum	Ta.10802.1.A1_at	BQ166597	-	-	1e+0	At2g26600	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zea mays	Zm.2884.1.S1_at	AW090890	hypothetical protein LOC100192085	-	1e+1	At5g28420	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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