CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621111_at

Gene name hypothetical protein LOC100254821

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 79.8 1621111_at BQ798687 hypothetical protein LOC100254821 - 2e+0 At4g33145 unknown protein S.X. H.G.
0.67 87.9 1622817_at CD012829 hypothetical protein LOC100251895 - 4e-42 At2g40660 tRNA-binding region domain-containing protein S.X. H.G.
0.50 72.7 1614845_at CF405772 hypothetical protein LOC100262902 - 1e+0 At1g65900 unknown protein S.X. H.G.
0.44 64.1 1613818_at BQ792651 hypothetical protein LOC100258929 - 2e-27 At5g22080 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.30 39.4 1621965_s_at BQ793756 hypothetical protein LOC100247098 - 8e-36 At5g23540 26S proteasome regulatory subunit, putative S.X. H.G.
0.21 24.0 1608425_at CB910322 hypothetical protein LOC100267018 - 1e-1 At5g67510 60S ribosomal protein L26 (RPL26B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.3 95.2 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436382 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436377 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 34 1621058_at CF205681.1 - - 8e-2 At3g15360 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4) C.G. S.X.
0.02 4e-1 34 1617575_s_at CD800130 hypothetical protein LOC100246832 - 1e-1 At3g15360 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4) C.G. S.X.
0.04 4e-1 34 1613592_at CF203857.1 - - 1e+0 At4g21366 ATP binding / protein tyrosine kinase C.G. S.X.
0.02 2e+0 32 1622779_at CD721742 - - 8e+0 At5g52740 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 2e+0 32 1622743_at BQ793332 hypothetical protein LOC100264845 - 8e-11 At3g06270 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.02 2e+0 32 1619768_at CB003377 - - 1e-7 At5g46210 CUL4 (CULLIN4) C.G. S.X.
0.02 2e+0 32 1618955_at CD721742 - - 8e+0 At5g52740 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 2e+0 32 1618950_at CD718527 - - 9e-2 At2g01350 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) C.G. S.X.
0.02 2e+0 32 1616323_at CF204348.1 - - 1e+0 At3g49100 signal recognition particle 9 kDa protein, putative / SRP9, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 34 Arabidopsis thaliana At4g33145 6240963 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.07 1e-7 57 Glycine max GmaAffx.30833.1.S1_at AW509222 - - 1e-5 At5g55640 unknown protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare EBes01_SQ003_K12_at EBes01_SQ003_K12 - - 4e+0 At3g09280 unknown protein C.G. S.X.
0.03 7e-1 36 Oryza sativa OsAffx.2152.1.S1_at - - - 0 C.G. S.X.
0.25 3e-21 103 Populus trichocarpa Ptp.4499.1.S1_at CN519933 hypothetical protein - 3e-8 At5g55640 unknown protein C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.22824.1.S1_at CA744525 - - 4e+0 At5g41090 anac095 (Arabidopsis NAC domain containing protein 95) C.G. S.X.
0.04 2e-1 36 Zea mays Zm.3183.1.A1_at CF634309 hypothetical protein LOC100274988 - 7e+0 At5g55640 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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