Gene omics information

Query gene ID 1621094_s_at
Gene name similar to AT4g27960
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91621094_s_atCF214762similar to AT4g27960-1e-72At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)S.X.H.G.
0.7189.51611442_s_atCF207003.1similar to ubiquitin-associated protein-4e-2At1g13635methyladenine glycosylase family proteinS.X.H.G.
0.5577.31619248_atCA813733hypothetical protein LOC100264750-3e-1At5g18100CSD3 (copper/zinc superoxide dismutase 3)S.X.H.G.
0.4868.81611958_atBQ800100hypothetical protein LOC100265795-8e-18At5g66930unknown proteinS.X.H.G.
0.4767.71613738_atCB343644hypothetical protein LOC100265879-6e-1At3g25420scpl21 (serine carboxypeptidase-like 21)S.X.H.G.
0.4464.11615691_atCF511397hypothetical protein LOC100251732-9e-56At4g03430EMB2770 (EMBRYO DEFECTIVE 2770)S.X.H.G.
0.4057.71613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1S.X.H.G.
0.1920.91615281_atCD800042hypothetical protein LOC100241659-2e-17At3g26560ATP-dependent RNA helicase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.294.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.094.2GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.95013861618769_atCF214762similar to AT4g27960-1e-72At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.7509161621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.475e-1124021609518_atCF512239similar to AT4g27960-3e-88At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.467e-1113981612192_s_atCF518716similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-86At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.467e-1113981606924_a_atCF518716similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-86At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.322e-582241615468_s_atCB973730similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-50At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.382e-552141615660_atCF215672similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-1e-51At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)C.G.S.X.
0.401e-532081610321_s_atCB980394hypothetical protein LOC100251531-9e-55At1g64230ubiquitin-conjugating enzyme, putativeC.G.S.X.
0.193e-331411622303_atCF518543--8e-23At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.601e-72274Arabidopsis thalianaAt5g41700834173UBC8 (UBIQUITIN CONJUGATING ENZYME 8)One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2---C.G.S.X.
0.475e-97355Glycine maxGmaAffx.91367.1.S1_s_atCF806415--5e-90At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.443e-49194Hordeum vulgareContig1431_atContig1431--2e-49At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.424e-58226Oryza sativaOs02g0261100AB074412.1-Ubiquitin-conjugating enzyme OsUBC5b2e-68At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.562e-136486Populus trichocarpaPtp.2488.1.S1_x_atCV234562hypothetical protein-2e-89At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.477e-40165Triticum aestivumTaAffx.31333.1.S1_atCA617346--3e-16At1g64230ubiquitin-conjugating enzyme, putativeC.G.S.X.
0.418e-53206Zea maysZm.3198.2.A1_a_atCN844169ubiquitin-conjugating enzyme E2-17 kDa 9 /// ubiquitin-conjugating enzyme E2-17 kDa 9-5e-78At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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